RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TYMPP19971 482 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ME2P23368 584 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PEX2P28328 305 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 EPHA3P29320 983 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CCR10P46092 362 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PSMD8P48556 350 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ERFP50548 548 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 NUDT2P50583 147 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 RAB27AP51159 221 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CLCN5P51795 746 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 AFF1P51825 1210 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 THOP1P52888 689 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 AQP4P55087 323 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TAS2R39P59534 338 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MPP1Q00013 466 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TNK2Q07912 1038 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MGAT3Q09327 533 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CTBP1Q13363 440 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CEACAM7Q14002 265 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 DSC3Q14574 896 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TRIP10Q15642 601 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PSMD5Q16401 504 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TECRLQ5HYJ1 363 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 NAIF1Q69YI7 327 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 RWDD4Q6NW29 188 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TICAM1Q8IUC6 712 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 DENND6AQ8IWF6 608 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ST13P4Q8IZP2 240 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PELI3Q8N2H9 469 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MARVELD2Q8N4S9 558 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 EFCAB3Q8N7B9 438 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 RTL3Q8N8U3 475 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TXNDC5Q8NBS9 432 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ADCY4Q8NFM4 1077 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 IPMKQ8NFU5 416 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CEP70Q8NHQ1 597 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CALML6Q8TD86 181 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 LPPQ93052 612 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CCDC124Q96CT7 223 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 RCN3Q96D15 328 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CCDC126Q96EE4 140 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ELMO2Q96JJ3 720 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MRGPRX2Q96LB1 330 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 UROC1Q96N76 676 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CATSPER2Q96P56 530 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CDRT15Q96T59 188 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MTG1Q9BT17 334 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 NUF2Q9BZD4 464 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC25A51Q9H1U9 297 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 EPB41L1Q9H4G0 881 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 ATP13A1Q9HD20 1204 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 RBM22Q9NW64 420 aaKnown RBP eCLIP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 CPA4Q9UI42 421 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 MAGED2Q9UNF1 606 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC4A7Q9Y6M7 1214 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 DOCK3Q8IZD9 2030 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 PRSS51A0A1B0GVH4 220 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 TCAF2A6NFQ2 919 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CASTOR2A6NHX0 329 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ENO4A6NNW6 628 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 KCNU1A8MYU2 1149 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIM38O00635 465 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 NEMP1O14524 444 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 TNFRSF10BO14763 440 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 GPR182O15218 404 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PAPSS2O95340 614 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 WISP3O95389 354 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 MT-CYBP00156 380 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CHRNA1P02708 482 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZCCHC18P0CG32 403 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CD1EP15812 388 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 XRCC1P18887 633 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SAT1P21673 171 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CALRP27797 417 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CCR1P32246 355 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 AVPR1AP37288 418 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PEX19P40855 299 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC1A2P43004 574 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 GLRBP48167 497 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 LEPRP48357 1165 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 INHBCP55103 352 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 GALNT1Q10472 559 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 POU6F1Q14863 301 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PDK3Q15120 406 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CCL14Q16627 93 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 LIN52Q52LA3 116 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 BTBD8Q5XKL5 378 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 NEPROQ6NW34 567 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 MSANTD2Q6P1R3 559 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CNSTQ6PJW8 725 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms