RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CNGA3Q16281 694 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TMC7Q7Z402 723 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TEX26Q8N6G2 289 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MAELQ96JY0 434 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 MRPL57Q9BQC6 102 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 MRPL46Q9H2W6 279 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 VPS45Q9NRW7 570 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 RGS18Q9NS28 235 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TTC3P53804 2025 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 CCDC78A2IDD5 438 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PMPCBO75439 489 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PIGNO95427 931 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 EOMESO95936 686 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 THRAP10827 490 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 RHOQP17081 205 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 RENBPP51606 427 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 NAGLUP54802 743 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 WNT3AP56704 352 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ASPHQ12797 758 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 HERC3Q15034 1050 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 GSTA3Q16772 222 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 LSM12Q3MHD2 195 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 SLC39A12Q504Y0 691 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ZNF470Q6ECI4 717 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 DEFB107AQ8IZN7 70 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ARHGAP18Q8N392 663 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 GATA6Q92908 595 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 LENG8Q96PV6 779 aaPredicted RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 OMDQ99983 421 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 TMEM248Q9NWD8 314 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 CLIC5Q9NZA1 410 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 MPP6Q9NZW5 540 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ZDHHC2Q9UIJ5 367 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 VPS28Q9UK41 221 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PRPF19Q9UMS4 504 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 GABRQQ9UN88 632 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 POMPQ9Y244 141 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 VWA8A3KMH1 1905 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 RGSL1A5PLK6 1076 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 FAM155AB1AL88 458 aaPredicted RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 MMP2P08253 660 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PIK3R1P27986 724 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PPARGP37231 505 aaPredicted RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 AVPR1AP37288 418 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 MAGEA11P43364 429 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 CHRNA4P43681 627 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 GLRBP48167 497 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 LEPRP48357 1165 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 PGGT1BP53609 377 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 FCGRTP55899 365 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 TAS2R39P59534 338 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 TBL3Q12788 808 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 NEPROQ6NW34 567 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 RNF111Q6ZNA4 994 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 PIWIL4Q7Z3Z4 852 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 DCP1BQ8IZD4 617 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 NUP93Q8N1F7 819 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDPN-212ENST00000621990 SLC25A41Q8N5S1 370 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 KDM1BQ8NB78 822 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 RP9Q8TA86 221 aaKnown RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 MICAL1Q8TDZ2 1067 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 NXNL1Q96CM4 212 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 WDR55Q9H6Y2 383 aaPredicted RBP9.53□□□□□ -0.88
PDPN-212ENST00000621990 FBXO5Q9UKT4 447 aa9.53□□□□□ -0.88
PDPN-212ENST00000621990 MROH6A6NGR9 719 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 WISP3O95389 354 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 OR4Q2P0C623 313 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CCR10P46092 362 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 KPNA2P52292 529 aaKnown RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 FAM189BP81408 668 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 DSG1Q02413 1049 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 TRIM32Q13049 653 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CUL3Q13618 768 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ZNF460Q14592 562 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 NFE2Q16621 373 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 MS4A13Q5J8X5 152 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CLLU1OSQ5K130 101 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ACAD11Q709F0 780 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 DHDDSQ86SQ9 333 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SETD3Q86TU7 594 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 RTN4RL1Q86UN2 441 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 KBTBD6Q86V97 674 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ZNF280BQ86YH2 543 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 OR13J1Q8NGT2 312 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CALML6Q8TD86 181 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SCYL1Q96KG9 808 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 NR1H4Q96RI1 486 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms