RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CDH17Q12864 832 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 ZNF792Q3KQV3 632 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 KLC3Q6P597 504 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 AMIGO2Q86SJ2 522 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 RBM12BQ8IXT5 1001 aaKnown RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 ZNF512Q96ME7 567 aaPredicted RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 COQ10BQ9H8M1 238 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 UBQLN1Q9UMX0 589 aaKnown RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 G3BP2Q9UN86 482 aaKnown RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 ARHGAP10A1A4S6 786 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 TRPC5OSA6NMA1 111 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 PNPLA4P41247 253 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 PSME3P61289 254 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 DUS1LQ6P1R4 473 aaKnown RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 PIWIL4Q7Z3Z4 852 aaKnown RBP13.23□□□□□ -0.29
SKP2-209ENST00000620197 GALNT7Q86SF2 657 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 TRIM73Q86UV7 250 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 MFSD2AQ8NA29 543 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 CDH7Q9ULB5 785 aa13.23□□□□□ -0.29
SKP2-209ENST00000620197 KCNU1A8MYU2 1149 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 ZNF286BP0CG31 522 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 CTBSQ01459 385 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 TECRLQ5HYJ1 363 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 PPP4R4Q6NUP7 873 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 SLC41A1Q8IVJ1 513 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 PTCD2Q8WV60 388 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 TFAP2CQ92754 450 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 MARK4Q96L34 752 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 SLC29A1Q99808 456 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 MRPL57Q9BQC6 102 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 MRPL1Q9BYD6 325 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 NXF3Q9H4D5 531 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 MROH8Q9H579 483 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 DDX18Q9NVP1 670 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 TUBA8Q9NY65 449 aaPredicted RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 STAP1Q9ULZ2 295 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 RUVBL2Q9Y230 463 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 AP4S1Q9Y587 144 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 AK5Q9Y6K8 562 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 PHGDHO43175 533 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 CD4P01730 458 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 HOXC13P31276 330 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 SQLEQ14534 574 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 GRIK4Q16099 956 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 REP15Q6BDI9 236 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 ITPRIPL1Q6GPH6 555 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 PPP1R14BQ96C90 147 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 NXNL1Q96CM4 212 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 MAML3Q96JK9 1138 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 DOK1Q99704 481 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 APBA2Q99767 749 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 MRPL46Q9H2W6 279 aaKnown RBP13.22□□□□□ -0.29
SKP2-209ENST00000620197 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
SKP2-209ENST00000620197 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 A0A087X1B8 175 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 RECQL4O94761 1208 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 IGLV3-25P01717 112 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 ENO3P13929 434 aaPredicted RBP13.21□□□□□ -0.29
SKP2-209ENST00000620197 LRPAP1P30533 357 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 CXCR3P49682 368 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 DAOAP59103 153 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 AFMIDQ63HM1 303 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 GK5Q6ZS86 529 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 LRRC43Q8N309 656 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 LZTR1Q8N653 840 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 FAM156AQ8NDB6 213 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 CEP70Q8NHQ1 597 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 SLC52A3Q9NQ40 469 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 MRPL40Q9NQ50 206 aaKnown RBP13.21□□□□□ -0.29
SKP2-209ENST00000620197 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
SKP2-209ENST00000620197 ACOT9Q9Y305 439 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 HTRA2O43464 458 aaPredicted RBP13.21□□□□□ -0.29
SKP2-209ENST00000620197 PSMC3P17980 439 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 PPIL2Q13356 520 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 PCID2Q5JVF3 399 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
SKP2-209ENST00000620197 LINC00523Q86TU6 105 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 FIBCD1Q8N539 461 aa13.21□□□□□ -0.29
SKP2-209ENST00000620197 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms