RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RFPL1O75677 317 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 SERPINI2O75830 405 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 INHBBP09529 407 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 CCNCP24863 283 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 DCKP27707 260 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ST13P50502 369 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 SNRPD2P62316 118 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 SFRP1Q8N474 314 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 BEND7Q8N7W2 519 aaPredicted RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 RAB2BQ8WUD1 216 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 PCDHGC3Q9UN70 934 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 COL14A1Q05707 1796 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 PSTPIP1O43586 416 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 BCAS2O75934 225 aaPredicted RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 TOMM70O94826 608 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 TRIM60Q495X7 471 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 BROXQ5VW32 411 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 FAM71AQ8IYT1 594 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 CELF2-AS1Q8N7Q2 184 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 SYNDIG1Q9H7V2 258 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 hCG_2039718K7EN88 272 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 INPP4BO15327 924 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 RAD17O75943 681 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 PRKCBP05771 671 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 IL1R1P14778 569 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 OSTNP61366 133 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ZNF267Q14586 743 aaPredicted RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 PIGGQ5H8A4 983 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 TFDP3Q5H9I0 405 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 CCBE1Q6UXH8 406 aaPredicted RBP12.39□□□□□ -0.43
MATR3-227ENST00000618441 XXYLT1Q8NBI6 393 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 NPLOC4Q8TAT6 608 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 UBASH3BQ8TF42 649 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 FAR1Q8WVX9 515 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 HMGXB4Q9UGU5 601 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 CDH7Q9ULB5 785 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 PCNTO95613 3336 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 BMP4P12644 408 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 PSMA2P25787 234 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 POLR2IP36954 125 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 DPYSL3Q14195 570 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 IGSF11Q5DX21 431 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 WDR44Q5JSH3 913 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 KATNAL2Q8IYT4 538 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 OR8H2Q8N162 312 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 KCTD4Q8WVF5 259 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 FUNDC2Q9BWH2 189 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 NDFIP2Q9NV92 336 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 IL37Q9NZH6 218 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ZW10O43264 779 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 SNAP29O95721 258 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 KRT6AP02538 564 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 KRT6BP04259 564 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 GAP43P17677 238 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 CASP3P42574 277 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 PGGT1BP53609 377 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 TUBB3Q13509 450 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 CDO1Q16878 200 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 ERAP2Q6P179 960 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 PODNQ7Z5L7 613 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 PROX1Q92786 737 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ZHX2Q9Y6X8 837 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 HNRNPCL2B2RXH8 293 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ARHGEF15O94989 841 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 FGF3P11487 239 aaPredicted RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 NLRP11P59045 1033 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 DGUOKQ16854 277 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ANGEL2Q5VTE6 544 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 SEL1L3Q68CR1 1132 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 PGAM4Q8N0Y7 254 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 SCML4Q8N228 414 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 ANKRD60Q9BZ19 345 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 TRMT13Q9NUP7 481 aaKnown RBP12.38□□□□□ -0.43
MATR3-227ENST00000618441 PARVAQ9NVD7 372 aa12.38□□□□□ -0.43
MATR3-227ENST00000618441 MYL3P08590 195 aa12.37□□□□□ -0.43
MATR3-227ENST00000618441 FASP25445 335 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms