RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LGI2Q8N0V4 545 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 LSMEM2Q8N112 164 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TTC30BQ8N4P2 665 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 WDTC1Q8N5D0 677 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 SMYD1Q8NB12 490 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 OR4C6Q8NH72 309 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 FAM81AQ8TBF8 368 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 OR8D1Q8WZ84 308 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 NT5C3BQ969T7 300 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 PGAP3Q96FM1 320 aaPredicted RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 RSRC1Q96IZ7 334 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 C1orf74Q96LT6 269 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TUBGCP2Q9BSJ2 902 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TRIM4Q9C037 500 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 ABCG4Q9H172 646 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 POLR1BQ9H9Y6 1135 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 THSD1Q9NS62 852 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TJP2Q9UDY2 1190 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 XPO7Q9UIA9 1087 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 NAALADL1Q9UQQ1 740 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 DMTF1Q9Y222 760 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TCAF2A6NFQ2 919 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 F5H5T6 163 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 PLRG1O43660 514 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 AHCYL1O43865 530 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 BNIP3LO60238 219 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 RNGTTO60942 597 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 CLDN11O75508 207 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 MTRF1O75570 445 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 PIAS2O75928 621 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 LSM8O95777 96 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 CALCAP01258 141 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ALPPL2P10696 532 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 CKMT1AP12532 417 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ZNF18P17022 549 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 RBMS1P29558 406 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 NUDT1P36639 197 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ERVPABLB-1P60509 514 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ZBED6P86452 979 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 SLC6A3Q01959 620 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 KCNMA1Q12791 1236 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 CNTN1Q12860 1018 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 OVGP1Q12889 678 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ACCSLQ4AC99 568 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 SETMARQ53H47 684 aaPredicted RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 ZNF542PQ5EBM4 170 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 C3orf38Q5JPI3 329 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 BRMS1LQ5PSV4 323 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 RAP1GAP2Q684P5 730 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 FOXR1Q6PIV2 292 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 LRRC31Q6UY01 552 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 PACS1Q6VY07 963 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 DSG4Q86SJ6 1040 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 TAC4Q86UU9 113 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 TRIM69Q86WT6 500 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 CIR1Q86X95 450 aaPredicted RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 TMEM35BQ8NCS4 154 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 MSANTD4Q8NCY6 345 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ENOX1Q8TC92 643 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 MAPK15Q8TD08 544 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ZFAND2BQ8WV99 257 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 MED8Q96G25 268 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 PRMT1Q99873 361 aaKnown RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 SPOCK3Q9BQ16 436 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 CALN1Q9BXU9 219 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 STK33Q9BYT3 514 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 NUP62CLQ9H1M0 184 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 FZD3Q9NPG1 666 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 ASCL3Q9NQ33 180 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 PLCB1Q9NQ66 1216 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 KLHL11Q9NVR0 708 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 DKK3Q9UBP4 350 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 DNAJC12Q9UKB3 198 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 SARDHQ9UL12 918 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 SATB2Q9UPW6 733 aa8.73□□□□□ -1.01
GPC6-202ENST00000617456 HEMK1Q9Y5R4 338 aaPredicted RBP8.73□□□□□ -1.01
GPC6-202ENST00000617456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
GPC6-202ENST00000617456 A0A1W2PQU0 124 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 CPED1A4D0V7 1026 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 TRIM64CA6NLI5 447 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 C1QTNF3-AMACRE9PGA6 284 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 FOXN3O00409 490 aaPredicted RBP8.72□□□□□ -1.01
GPC6-202ENST00000617456 ALOX15BO15296 676 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 GPR37O15354 613 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 SLC7A4O43246 635 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 DXOO77932 396 aaKnown RBP8.72□□□□□ -1.01
GPC6-202ENST00000617456 FESP07332 822 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 TACR2P21452 398 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 CLDN2P57739 230 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 NSUN2Q08J23 767 aaKnown RBP eCLIP8.72□□□□□ -1.01
GPC6-202ENST00000617456 NFATC3Q12968 1075 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 ARHGAP44Q17R89 818 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 ZSCAN23Q3MJ62 389 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 MIIPQ5JXC2 388 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 KLHDC7AQ5VTJ3 777 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 AGBL4Q5VU57 503 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 FAM46CQ5VWP2 391 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms