RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PTCD2Q8WV60 388 aaKnown RBP14.18□□□□□ -0.14
SSBP2-220ENST00000615665 RTP4Q96DX8 246 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 GATA5Q9BWX5 397 aaPredicted RBP14.18□□□□□ -0.14
SSBP2-220ENST00000615665 UXTQ9UBK9 157 aaPredicted RBP14.18□□□□□ -0.14
SSBP2-220ENST00000615665 SNX13Q9Y5W8 968 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 MRASO14807 208 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 PFKMP08237 780 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 LRPAP1P30533 357 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 MRPS22P82650 360 aaKnown RBP14.18□□□□□ -0.14
SSBP2-220ENST00000615665 PSMD5Q16401 504 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 TIFABQ6ZNK6 161 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 CDHR3Q6ZTQ4 885 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 FBXO39Q8N4B4 442 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 KBTBD7Q8WVZ9 684 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 CNDP1Q96KN2 507 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 CRTAC1Q9NQ79 661 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
SSBP2-220ENST00000615665 TK2O00142 265 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 PEX11AO75192 247 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 MBL2P11226 248 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 HNRNPLP14866 589 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 IDH3AP50213 366 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 AAGABQ6PD74 315 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 GLT6D1Q7Z4J2 308 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CARNMT1Q8N4J0 409 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 HDAC10Q969S8 669 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 MIEF2Q96C03 454 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 APOL5Q9BWW9 433 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 VPS45Q9NRW7 570 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CATSPERZQ9NTU4 200 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 VPS28Q9UK41 221 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CROTQ9UKG9 612 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 SLC27A5Q9Y2P5 690 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 TCAF1Q9Y4C2 921 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 TOP3BO95985 862 aaKnown RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CYBBP04839 570 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 DLDP09622 509 aaKnown RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 GCAP28676 217 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 IRX1P78414 480 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 DYNC1I2Q13409 638 aaKnown RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 OLIG2Q13516 323 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 FAM45BPQ6NSW5 357 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ESRP1Q6NXG1 681 aaKnown RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ZYG11AQ6WRX3 759 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CTU1Q7Z7A3 348 aaKnown RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 FAM45AQ8TCE6 357 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 RSPH1Q8WYR4 309 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 NXNL1Q96CM4 212 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 RCN3Q96D15 328 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 TMEM169Q96HH4 297 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CCDC138Q96M89 665 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 Q9Y3F1 56 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■■■■■ 111.2
SSBP2-220ENST00000615665 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ITM2AO43736 263 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 TPST1O60507 370 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 RHOAP61586 193 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ARL13AQ5H913 290 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-220ENST00000615665 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 SLC25A23Q9BV35 468 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 IRAK2O43187 625 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 E2F6O75461 281 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ITGA7Q13683 1181 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ACSBG2Q5FVE4 666 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 ING2Q9H160 280 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 GMIPQ9P107 970 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 SIRPGQ9P1W8 387 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 CRLS1Q9UJA2 301 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 SH3BP1Q9Y3L3 701 aa14.17□□□□□ -0.14
SSBP2-220ENST00000615665 NRXN2Q9P2S2 1712 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 RBM47A0AV96 593 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 TSPAN3O60637 253 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 SNUPNO95149 360 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 GJA5P36382 358 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 KCNA10Q16322 511 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 RTKNQ9BST9 563 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 BEST1O76090 585 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 ATP6V1B1P15313 513 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 ATP5C1P36542 298 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 AASDHQ4L235 1098 aaPredicted RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 STXBP5Q5T5C0 1151 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 ANKS6Q68DC2 871 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 ISLR2Q6UXK2 745 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 RTL3Q8N8U3 475 aaKnown RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 RHBDL2Q9NX52 303 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.16□□□□□ -0.14
SSBP2-220ENST00000615665 VWA7Q9Y334 891 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 PIRTP0C851 137 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 POLD2P49005 469 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 TAZQ16635 292 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 CCDC142Q17RM4 750 aa14.16□□□□□ -0.14
SSBP2-220ENST00000615665 DENND6AQ8IWF6 608 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms