RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ESRP1Q6NXG1 681 aaKnown RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 PKN3Q6P5Z2 889 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 CFAP61Q8NHU2 1237 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 RSRC1Q96IZ7 334 aaKnown RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 PRICKLE1Q96MT3 831 aaPredicted RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 ANKRD27Q96NW4 1050 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 FSD1LQ9BXM9 530 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 ZNF358Q9NW07 568 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 MARCOQ9UEW3 520 aaPredicted RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 ZFP37Q9Y6Q3 630 aaPredicted RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 PTPRSQ13332 1948 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 MIA3Q5JRA6 1907 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 ANAPC1Q9H1A4 1944 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 F5H5T6 163 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 SCAMP3O14828 347 aaKnown RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 LMNAP02545 664 aaKnown RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 LIMK2P53671 638 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 TBCCQ15814 346 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 HECTD3Q5T447 861 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 TEX26Q8N6G2 289 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 STN1Q9H668 368 aaKnown RBP19.35■□□□□ 0.69
MMP28-204ENST00000615136 SNX15Q9NRS6 342 aa19.35■□□□□ 0.69
MMP28-204ENST00000615136 ENTPD5O75356 428 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 SPATA31D3P0C874 917 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 KITP10721 976 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 IRF1P10914 325 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 SPATA31D4Q6ZUB0 917 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 TMEM150AQ86TG1 271 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 TREML1Q86YW5 311 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 PPP1R14CQ8TAE6 165 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 TTC8Q8TAM2 541 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 ARRDC2Q8TBH0 407 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 MYRFLQ96LU7 910 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 HERC2P3Q9BVR0 1158 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 ENTPD7Q9NQZ7 604 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 KIAA1671Q9BY89 1806 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 H3BNC9 293 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 STC2O76061 302 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 TIMP1P01033 207 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 SERPINE1P05121 402 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 SERPINA6P08185 405 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 GABRB3P28472 473 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 TYK2P29597 1187 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 RFC2P35250 354 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 KPNA1P52294 538 aaPredicted RBP19.34■□□□□ 0.69
MMP28-204ENST00000615136 TWF1Q12792 350 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 C5orf22Q49AR2 442 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 PLD6Q8N2A8 252 aaKnown RBP19.34■□□□□ 0.69
MMP28-204ENST00000615136 PDZD8Q8NEN9 1154 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 OR7D4Q8NG98 312 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 PIWIL2Q8TC59 973 aaKnown RBP19.34■□□□□ 0.69
MMP28-204ENST00000615136 N4BP2L2Q92802 583 aaPredicted RBP19.34■□□□□ 0.69
MMP28-204ENST00000615136 FATE1Q969F0 183 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 ZNF570Q96NI8 536 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 CCDC106Q9BWC9 280 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.34■□□□□ 0.69
MMP28-204ENST00000615136 TCAF1Q9Y4C2 921 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 CHD5Q8TDI0 1954 aa19.34■□□□□ 0.69
MMP28-204ENST00000615136 VAPBO95292 243 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 RPSAP08865 295 aaKnown RBP19.33■□□□□ 0.68
MMP28-204ENST00000615136 GLDCP23378 1020 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 GRK2P25098 689 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 GJA8P48165 433 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 ARCN1P48444 511 aaKnown RBP19.33■□□□□ 0.68
MMP28-204ENST00000615136 SLC1A6P48664 564 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 SERPINB8P50452 374 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 IL10RBQ08334 325 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 MPP3Q13368 585 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 MSLNQ13421 630 aaPredicted RBP19.33■□□□□ 0.68
MMP28-204ENST00000615136 CNGA3Q16281 694 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 PARP15Q460N3 678 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 TPGS2Q68CL5 300 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 WDR75Q8IWA0 830 aaKnown RBP19.33■□□□□ 0.68
MMP28-204ENST00000615136 DENND6AQ8IWF6 608 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 TEX9Q8N6V9 391 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 OVCA2Q8WZ82 227 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 MCUR1Q96AQ8 359 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 CEP295NLQ96MC4 621 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 SLC22A12Q96S37 553 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 CYP2S1Q96SQ9 504 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 C11orf49Q9H6J7 331 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 DCLRE1BQ9H816 532 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 ATP13A1Q9HD20 1204 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 TRPM5Q9NZQ8 1165 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 TMEM216Q9P0N5 145 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 COPG2Q9UBF2 871 aa19.33■□□□□ 0.68
MMP28-204ENST00000615136 AP3B1O00203 1094 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 ITM2AO43736 263 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 KCNA4P22459 653 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 HOXD9P28356 352 aaPredicted RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 CORO1AP31146 461 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 SPRP35270 261 aaPredicted RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 ALDH1A3P47895 512 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 MAPKAPK2P49137 400 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 HARS2P49590 506 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 IRF9Q00978 393 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 RAB33AQ14088 237 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 LBRQ14739 615 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 PNPLA1Q8N8W4 532 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms