RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 DDX3XO00571 662 aaKnown RBP eCLIP23.05■■□□□ 1.28
FAM228B-208ENST00000613899 FTLP02792 175 aaPredicted RBP23.05■■□□□ 1.28
FAM228B-208ENST00000613899 MYBL1P10243 752 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 NDST2P52849 883 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 SGCGQ13326 291 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 FGL2Q14314 439 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 NR1I3Q14994 352 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 HS1BP3Q53T59 392 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 ERMARDQ5T6L9 678 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 GDPD4Q6W3E5 623 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 TMPRSS12Q86WS5 348 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 ZNF653Q96CK0 615 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 KLC2Q9H0B6 622 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 DHX35Q9H5Z1 703 aaKnown RBP23.05■■□□□ 1.28
FAM228B-208ENST00000613899 GPATCH2LQ9NWQ4 482 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 UBA2Q9UBT2 640 aaPredicted RBP23.05■■□□□ 1.28
FAM228B-208ENST00000613899 CNOT8Q9UFF9 292 aaKnown RBP23.05■■□□□ 1.28
FAM228B-208ENST00000613899 MFHAS1Q9Y4C4 1052 aa23.05■■□□□ 1.28
FAM228B-208ENST00000613899 CFAP47Q6ZTR5 3102 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 ZZEF1O43149 2961 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 PAK4O96013 591 aaPredicted RBP23.04■■□□□ 1.28
FAM228B-208ENST00000613899 CAPNS1P04632 268 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 HNF1BP35680 557 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 ILKQ13418 452 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 Q6ZSR6 202 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 SLC22A18ASQ8N1D0 253 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 DENND6BQ8NEG7 585 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 ASB12Q8WXK4 309 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 TSC1Q92574 1164 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 VOPP1Q96AW1 172 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 LENG8Q96PV6 779 aaPredicted RBP23.04■■□□□ 1.28
FAM228B-208ENST00000613899 NCAPGQ9BPX3 1015 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 SNRNP25Q9BV90 132 aaKnown RBP23.04■■□□□ 1.28
FAM228B-208ENST00000613899 C1QTNF2Q9BXJ5 285 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 LRRC19Q9H756 370 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 GPR27Q9NS67 375 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 FREM2Q5SZK8 3169 aa23.04■■□□□ 1.28
FAM228B-208ENST00000613899 IGLON5A6NGN9 336 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 FPGTO14772 594 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 PRPSAP2O60256 369 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 CKMT2P17540 419 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 DGKAP23743 735 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 RABIFP47224 123 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 ZNF135P52742 658 aaPredicted RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 GRM3Q14832 879 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 TDRD12Q587J7 1177 aaKnown RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 PSTKQ8IV42 348 aaKnown RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 BMFQ96LC9 184 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 PEBP4Q96S96 227 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 CPEB1Q9BZB8 566 aaKnown RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 CBX8Q9HC52 389 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 MRPL47Q9HD33 250 aaKnown RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 DKK3Q9UBP4 350 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 PCSK1NQ9UHG2 260 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 GGT7Q9UJ14 662 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 ITM2BQ9Y287 266 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 TDRD6O60522 2096 aaKnown RBP23.03■■□□□ 1.28
FAM228B-208ENST00000613899 ZFHX4Q86UP3 3567 aa23.03■■□□□ 1.28
FAM228B-208ENST00000613899 PKD1L2Q7Z442 2459 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 A0A1W2PQJ5 194 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 ARHGAP42A6NI28 874 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 AREL1O15033 823 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 DAPK3O43293 454 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 PIAS2O75928 621 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 FANCCQ00597 558 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 ZNF211Q13398 564 aaPredicted RBP23.02■■□□□ 1.28
FAM228B-208ENST00000613899 CA9Q16790 459 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 RFX8Q6ZV50 586 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 TTC7BQ86TV6 843 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 LUZP1Q86V48 1076 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 DNAAF5Q86Y56 855 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 ARFGAP1Q8N6T3 406 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 OR4C6Q8NH72 309 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 PDFQ9HBH1 243 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 LHX3Q9UBR4 397 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 DMXL2Q8TDJ6 3036 aa23.02■■□□□ 1.28
FAM228B-208ENST00000613899 CHD6Q8TD26 2715 aa23.02■■□□□ 1.27
FAM228B-208ENST00000613899 ANKRD11Q6UB99 2663 aaPredicted RBP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 FAM149AA5PLN7 773 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 POM121BA6NF01 834 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 RAD51BO15315 384 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 SPINT1O43278 529 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 PRAMEF11O60813 436 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 ALPPL2P10696 532 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 SKILP12757 684 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 MIPP30301 263 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 HNRNPKP61978 463 aaKnown RBP eCLIP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 PROX2Q3B8N5 592 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 VPS36Q86VN1 386 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 PARGQ86W56 976 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 SLC25A45Q8N413 288 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 IQCDQ96DY2 449 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 CELF6Q96J87 481 aaKnown RBP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 EXOC2Q96KP1 924 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 KCTD15Q96SI1 283 aaPredicted RBP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 KLF6Q99612 283 aaPredicted RBP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 C1QTNF7Q9BXJ2 289 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 TRIM7Q9C029 511 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 ISCUQ9H1K1 167 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 DNAJC28Q9NX36 388 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms