RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 RBM22Q9NW64 420 aaKnown RBP eCLIP16.83■□□□□ 0.28
IRF1-211ENST00000613424 CEP192Q8TEP8 1941 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 SLC7A4O43246 635 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 GJB3O75712 270 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 PIGNO95427 931 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 RETP07949 1114 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 CR2P20023 1033 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 ITGB7P26010 798 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 HSPA9P38646 679 aaKnown RBP16.82■□□□□ 0.28
IRF1-211ENST00000613424 MAXP61244 160 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 ZNF33AQ06730 810 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 CCDC15Q0P6D6 951 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 GRM3Q14832 879 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 PIP5KL1Q5T9C9 394 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 ERN2Q76MJ5 926 aaKnown RBP16.82■□□□□ 0.28
IRF1-211ENST00000613424 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 NSMCE3Q96MG7 304 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 MGME1Q9BQP7 344 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
IRF1-211ENST00000613424 C16orf96A6NNT2 1141 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 METTL12A8MUP2 240 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 APOC4-APOC2K7ER74 178 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 KCNK1O00180 336 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 PLRG1O43660 514 aaKnown RBP16.81■□□□□ 0.28
IRF1-211ENST00000613424 TJP3O95049 919 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 EPN2O95208 641 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 JCHAINP01591 159 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 APOC2P02655 101 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 PLA2G5P39877 138 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 ADPRHP54922 357 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 ITKQ08881 620 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 FBXL19Q6PCT2 694 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 NCEH1Q6PIU2 408 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 PARS2Q7L3T8 475 aaKnown RBP16.81■□□□□ 0.28
IRF1-211ENST00000613424 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 OR2T34Q8NGX1 318 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 TFB1MQ8WVM0 346 aaKnown RBP16.81■□□□□ 0.28
IRF1-211ENST00000613424 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 HSPA12BQ96MM6 686 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 NUDCD1Q96RS6 583 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 TUBGCP5Q96RT8 1024 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 ARRDC1-AS1Q9H2J1 176 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 SUV39H2Q9H5I1 410 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 SCUBE2Q9NQ36 999 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 AMACRQ9UHK6 382 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 GMEB2Q9UKD1 530 aa16.81■□□□□ 0.28
IRF1-211ENST00000613424 ZFHX2Q9C0A1 2572 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3DA0A087WVF3 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3IA0A087WXS9 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3EA0A087X179 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3KA0A087X1G2 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3FA6NER0 549 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 LRRC72A6NJI9 287 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3LB9A6J9 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3HP0C7X1 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 ADRB3P13945 408 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 ITPKAP23677 461 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 MAPK8P45983 427 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 NEK3P51956 506 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TAS2R38P59533 333 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 IFI35P80217 286 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 CREB5Q02930 508 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 BCL2L1Q07817 233 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 PRKD1Q15139 912 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 FAM182AQ5T1J6 154 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 LYSMD4Q5XG99 296 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3GQ6DHY5 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3CQ6IPX1 549 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 ZC3H18Q86VM9 953 aaKnown RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 HCAR2Q8TDS4 363 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
IRF1-211ENST00000613424 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 TLR10Q9BXR5 811 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 ATP13A3Q9H7F0 1226 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 NOD2Q9HC29 1040 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 SEPT10Q9P0V9 454 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 NCDNQ9UBB6 729 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 DKK3Q9UBP4 350 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 GPR179Q6PRD1 2367 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 FRYLO94915 3013 aa16.8■□□□□ 0.28
IRF1-211ENST00000613424 BCLAF3A2AJT9 711 aaKnown RBP16.79■□□□□ 0.28
IRF1-211ENST00000613424 USP27XA6NNY8 438 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 HACD1B0YJ81 288 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 C10orf142B7Z368 130 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 KCNK3O14649 394 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 GFRA3O60609 400 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 NEBLO76041 1014 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 FSBPO95073 299 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 HLA-DQB2P05538 268 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 TIMP2P16035 220 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 MAOBP27338 520 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 SERPINA4P29622 427 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 AP1S1P61966 158 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 OTUD4Q01804 1114 aaKnown RBP16.79■□□□□ 0.28
IRF1-211ENST00000613424 ZBTB17Q13105 803 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms