RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TCEAL5Q5H9L2 206 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 GPR149Q86SP6 731 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 TRABD2AQ86V40 505 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
CBWD1-220ENST00000612045 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 TNS4Q8IZW8 715 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
CBWD1-220ENST00000612045 MFSD3Q96ES6 412 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 ACTL7BQ9Y614 415 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 FAM169AQ9Y6X4 670 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 BPTFQ12830 3046 aa12.45□□□□□ -0.42
CBWD1-220ENST00000612045 FAM155BO75949 473 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MT-CO1P00395 513 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 EPOP01588 193 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ATXN1LP0C7T5 689 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 TYRP14679 529 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 HLA-FP30511 346 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SERPINH1P50454 418 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 PLK1P53350 603 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 PPARDQ03181 441 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CDK18Q07002 472 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 NSUN2Q08J23 767 aaKnown RBP eCLIP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SIRPB2Q5JXA9 342 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 LY6G5CQ5SRR4 150 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ZNF449Q6P9G9 518 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 RNF135Q8IUD6 432 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 EFHBQ8N7U6 833 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 PPHLN1Q8NEY8 458 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MZB1Q8WU39 189 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CDKL2Q92772 493 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 FGF13Q92913 245 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 RSPRY1Q96DX4 576 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 IFT43Q96FT9 208 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CERS2Q96G23 380 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 FEM1CQ96JP0 617 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 NSMCE3Q96MG7 304 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ZNF778Q96MU6 729 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 NUDCD1Q96RS6 583 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MRM3Q9HC36 420 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 LHX3Q9UBR4 397 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 INTS6Q9UL03 887 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 IQANK1A0A1B0GTG1 560 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 UGT1A9O60656 530 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ERVK-10P10266 1014 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ADRA1DP25100 572 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 NMBRP28336 390 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 VIPR2P41587 438 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MGAT5Q09328 741 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 TERF2Q15554 542 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 FAM78AQ5JUQ0 283 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ARMC3Q5W041 872 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ASTLQ6HA08 431 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ANKRD54Q6NXT1 300 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SYCE2Q6PIF2 218 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 KIAA1958Q8N8K9 716 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ZNF557Q8N988 423 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SMARCD2Q92925 531 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SELENOSQ9BQE4 189 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 CAPS2Q9BXY5 557 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 UGT1A7Q9HAW7 530 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 UGT1A10Q9HAW8 530 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 UGT1A8Q9HAW9 530 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 GDE1Q9NZC3 331 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 MARK1Q9P0L2 795 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 SENP1Q9P0U3 644 aa12.44□□□□□ -0.42
CBWD1-220ENST00000612045 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
CBWD1-220ENST00000612045 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
CBWD1-220ENST00000612045 K7ERQ8 282 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 BRAFP15056 766 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 HLA-DPA1P20036 260 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
CBWD1-220ENST00000612045 RHOAP61586 193 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 GUCY1A3Q02108 690 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 NAB1Q13506 487 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 MARK2Q7KZI7 788 aaKnown RBP12.43□□□□□ -0.42
CBWD1-220ENST00000612045 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 MDM1Q8TC05 714 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 OSCP1Q8WVF1 389 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 DUS2Q9NX74 493 aaKnown RBP12.43□□□□□ -0.42
CBWD1-220ENST00000612045 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
CBWD1-220ENST00000612045 ZFATQ9P243 1243 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms