RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 SPATA22Q8NHS9 363 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 USP33Q8TEY7 942 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 RANBP9Q96S59 729 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 SNX25Q9H3E2 840 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 NXF3Q9H4D5 531 aaKnown RBP15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 PNPLA3Q9NST1 481 aa15.29■□□□□ 0.04
PCDHGB1-202ENST00000611598 FAM95CA0A1B0GW59 222 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 MAGEB16A2A368 324 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 ZNF839A8K0R7 811 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 NRP1O14786 923 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 FYNP06241 537 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 GNAO1P09471 354 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 HADHAP40939 763 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 RAB10P61026 200 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 FASTKQ14296 549 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 POU6F1Q14863 301 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 NOL9Q5SY16 702 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 STON2Q8WXE9 905 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 PPWD1Q96BP3 646 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 CELF6Q96J87 481 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 EBF1Q9UH73 591 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 ZNF510Q9Y2H8 683 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 TDRKHQ9Y2W6 561 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 CROCCQ5TZA2 2017 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 TCRBV3S1A0A5B6 114 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 TRPC5OSA6NMA1 111 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 H0YJX3 145 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 TMX2-CTNND1H3BSU7 103 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 ARHGAP1Q07960 439 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 CDH17Q12864 832 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 SEMA3BQ13214 749 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 LAMC2Q13753 1193 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 CHSY3Q70JA7 882 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 CPNE9Q8IYJ1 553 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 KLHL23Q8NBE8 558 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 HEXDCQ8WVB3 486 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 KIFC1Q9BW19 673 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 WDR6Q9NNW5 1121 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 NCKIPSDQ9NZQ3 722 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 SLC2A6Q9UGQ3 507 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 STAP1Q9ULZ2 295 aa15.28■□□□□ 0.04
PCDHGB1-202ENST00000611598 PAPPA2Q9BXP8 1791 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 ERI2A8K979 691 aaKnown RBP15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 PSMD12O00232 456 aaPredicted RBP15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 AURKAO14965 403 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 IMPDH2P12268 514 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 STMN1P16949 149 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 ARNTP27540 789 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 SLC7A1P30825 629 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 ENTPD1P49961 510 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 PLK1P53350 603 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 TAS2R39P59534 338 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 NHSL2Q5HYW2 709 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 ESRP1Q6NXG1 681 aaKnown RBP15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 OSTM1Q86WC4 334 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 PPP1R13LQ8WUF5 828 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 MRPL46Q9H2W6 279 aaKnown RBP15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 SPAG4Q9NPE6 437 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 PPP1R1BQ9UD71 204 aaPredicted RBP15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 CD300AQ9UGN4 299 aa15.27■□□□□ 0.04
PCDHGB1-202ENST00000611598 SBF1O95248 1867 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 NPHS1O60500 1241 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 FOXD2O60548 495 aaPredicted RBP15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 USP2O75604 605 aaPredicted RBP15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 RECQL4O94761 1208 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 MT-CYBP00156 380 aaPredicted RBP15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 HNRNPCP07910 306 aaKnown RBP eCLIP15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 UGT1A6P19224 532 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 TTLL4Q14679 1199 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 ITPRIPL1Q6GPH6 555 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 ZBTB49Q6ZSB9 765 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 PNPLA1Q8N8W4 532 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 B3GALNT2Q8NCR0 500 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 FNDC8Q8TC99 324 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 CANT1Q8WVQ1 401 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 HDAC11Q96DB2 347 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 ELMO2Q96JJ3 720 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 TEKT5Q96M29 485 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 ANKRD60Q9BZ19 345 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 RRN3Q9NYV6 651 aa15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 IPO11Q9UI26 975 aaKnown RBP15.27■□□□□ 0.03
PCDHGB1-202ENST00000611598 SAC3D1A6NKF1 404 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 MRASO14807 208 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 UBDO15205 165 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 CYP2C9P11712 490 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 SLC1A2P43004 574 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 STX5Q13190 355 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 PIWIL4Q7Z3Z4 852 aaKnown RBP15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 RNF135Q8IUD6 432 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 APOBEC3FQ8IUX4 373 aaKnown RBP15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 RBM12BQ8IXT5 1001 aaKnown RBP15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 ZNF419Q96HQ0 510 aaPredicted RBP15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 SLC2A13Q96QE2 648 aa15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 UHRF1Q96T88 793 aaPredicted RBP15.26■□□□□ 0.03
PCDHGB1-202ENST00000611598 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms