RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CYP1B1Q16678 543 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CACHD1Q5VU97 1274 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ZDHHC24Q6UX98 284 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ANKS1BQ7Z6G8 1248 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GPSM1Q86YR5 675 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SCUBE1Q8IWY4 988 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 DEFB107AQ8IZN7 70 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ST13P4Q8IZP2 240 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 VPS37AQ8NEZ2 397 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 OR4K2Q8NGD2 314 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SMG7Q92540 1137 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CASP10Q92851 521 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC39A8Q9C0K1 460 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 MYLK2Q9H1R3 596 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ACSS2Q9NR19 701 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 VPS45Q9NRW7 570 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 DNAJB4Q9UDY4 337 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 EVLQ9UI08 416 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 LNPEPQ9UIQ6 1025 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RAD54BQ9Y620 910 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ZFP37Q9Y6Q3 630 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC85CA6NKD9 419 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GPR32O75388 356 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 AP2A1O95782 977 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 FGF1P05230 155 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC2A4P14672 509 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GJA1P17302 382 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 HLA-DPA1P20036 260 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PTPN4P29074 926 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SOAT1P35610 550 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 YBEYP58557 167 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RAB10P61026 200 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GNA12Q03113 381 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TRIM60Q495X7 471 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ICE2Q659A1 982 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TRMT10BQ6PF06 316 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 FAM151BQ6UXP7 276 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PTGR2Q8N8N7 351 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC44A1Q8WWI5 657 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RPL10LQ96L21 214 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TCF25Q9BQ70 676 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC7A5P2Q9GIP4 190 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ARL15Q9NXU5 204 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CNTRLQ7Z7A1 2325 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 GNG14A0A1W2PPG7 69 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MEI4A8MW99 385 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CCND1P24385 295 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CCNCP24863 283 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 HNRNPH1P31943 449 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CHRNA4P43681 627 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SLC11A1P49279 550 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CDH13P55290 713 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 GHRHRQ02643 423 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 STXBP5Q5T5C0 1151 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 DRICH1Q6PGQ1 229 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 C15orf39Q6ZRI6 1047 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 RTL3Q8N8U3 475 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SMG8Q8ND04 991 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CEP70Q8NHQ1 597 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MCOLN3Q8TDD5 553 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TBATAQ96M53 351 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PANX3Q96QZ0 392 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PRPF18Q99633 342 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 ANKRD6Q9Y2G4 727 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 ATP6AP2A0A1C7CYW4 349 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TCRBV7S3A2A0A539 114 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 GCATO75600 419 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 LYPLA1O75608 230 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 ATP6AP2O75787 350 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 UGT2B4P06133 528 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CYP2A6P11509 494 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PCNAP12004 261 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.235e-8■□□□□ 8.7
CSDE1-218ENST00000610726 CLCN5P51795 746 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 RAP1GDS1P52306 607 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CYP4F8P98187 520 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 NFYCQ13952 458 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TRIP4Q15650 581 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SLC1A5Q15758 541 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PARP15Q460N3 678 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PPM1JQ5JR12 505 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 ESRP1Q6NXG1 681 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 DSG4Q86SJ6 1040 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SLC44A2Q8IWA5 706 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CHPFQ8IZ52 775 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 OR4L1Q8NH43 312 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 STAG3L4Q8TBR4 150 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SPOCK2Q92563 424 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CENPTQ96BT3 561 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM209Q96SK2 561 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 HGH1Q9BTY7 390 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 YIPF2Q9BWQ6 316 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MIOSQ9NXC5 875 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 KIF17Q9P2E2 1029 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms