RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 FAM46DQ8NEK8 389 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 DQX1Q8TE96 717 aaKnown RBP9.43□□□□□ -0.9
CTCFL-220ENST00000608858 SEMA4DQ92854 862 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 SLC39A13Q96H72 371 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 LENG8Q96PV6 779 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-220ENST00000608858 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 EPAS1Q99814 870 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 NUDT22Q9BRQ3 303 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 MUC3BQ9H195 1237 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 DMAC2Q9NW81 257 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 HESX1Q9UBX0 185 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 KCNMB2Q9Y691 235 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 PDZD2O15018 2839 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 APCP25054 2843 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 HIVEP1P15822 2718 aa9.43□□□□□ -0.9
CTCFL-220ENST00000608858 IGHV5-10-1A0A0J9YXX1 117 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 B4DGG1 531 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 FURINP09958 794 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 ITGB7P26010 798 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 IGFALSP35858 605 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 VAMP7P51809 220 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 NEK3P51956 506 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 HK3P52790 923 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 SNRPFP62306 86 aaKnown RBP9.42□□□□□ -0.9
CTCFL-220ENST00000608858 B4GALNT1Q00973 533 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 BST2Q10589 180 aaKnown RBP9.42□□□□□ -0.9
CTCFL-220ENST00000608858 ERV3-1Q14264 604 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 ALG11Q2TAA5 492 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 ANKS6Q68DC2 871 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 SP5Q6BEB4 398 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-220ENST00000608858 TCTN3Q6NUS6 607 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 TIPARPQ7Z3E1 657 aaKnown RBP9.42□□□□□ -0.9
CTCFL-220ENST00000608858 TAF8Q7Z7C8 310 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 FAM129CQ86XR2 697 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 C12orf56Q8IXR9 622 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTCFL-220ENST00000608858 DHX58Q96C10 678 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 CCDC74BQ96LY2 380 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 DPEP2Q9H4A9 486 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 CNGB3Q9NQW8 809 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 APPL1Q9UKG1 709 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 MAP4K5Q9Y4K4 846 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 OR51B4Q9Y5P0 310 aa9.42□□□□□ -0.9
CTCFL-220ENST00000608858 A8MU76 341 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 IKBKBO14920 756 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 KRT86O43790 486 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 DNAJB5O75953 348 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 LDLRP01130 860 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 APOEP02649 317 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 ALPIP09923 528 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 GLB1P16278 677 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 F8A1P23610 371 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 L1CAMP32004 1257 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-220ENST00000608858 PITX1P78337 314 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-220ENST00000608858 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 FBXL22Q6P050 247 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 LVRNQ6Q4G3 990 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 TAC4Q86UU9 113 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 FSTL5Q8N475 847 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-220ENST00000608858 CCDC150Q8NCX0 1101 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 GPR156Q8NFN8 814 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 OR6K2Q8NGY2 324 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 KCTD13Q8WZ19 329 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 STARD8Q92502 1023 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 KIAA1143Q96AT1 154 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-220ENST00000608858 FAM149B1Q96BN6 582 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 C19orf60Q96EN9 201 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-220ENST00000608858 RRN3Q9NYV6 651 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 DKK3Q9UBP4 350 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 VANGL2Q9ULK5 521 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 COQ6Q9Y2Z9 468 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 ACTL7AQ9Y615 435 aa9.41□□□□□ -0.9
CTCFL-220ENST00000608858 CSMD2Q7Z408 3487 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 MED13LQ71F56 2210 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SHANK1Q9Y566 2161 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 HIVEP3Q5T1R4 2406 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 KATNA1O75449 491 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CPNE6O95741 557 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 NR3C1P04150 777 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CSTF2P33240 577 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 ABL2P42684 1182 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 MAZP56270 477 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SRP54P61011 504 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 INPP5JQ15735 1006 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 KLHL40Q2TBA0 621 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms