RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TTC3P53804 2025 aa20.45■□□□□ 0.86
SHKBP1-225ENST00000600733 SLC22A2O15244 555 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 PAGE1O75459 146 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 IGLV3-25P01717 112 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 GSTT1P30711 240 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 ADRA1AP35348 466 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 BRCC3P46736 316 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 SEPT6Q14141 434 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 TLR1Q15399 786 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 AGMOQ6ZNB7 445 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 SETD3Q86TU7 594 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 PNPLA1Q8N8W4 532 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 BHLHE22Q8NFJ8 381 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 CENPKQ9BS16 269 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 CHST12Q9NRB3 414 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 NYNRINQ9P2P1 1898 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 MATN3O15232 486 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 ART3Q13508 389 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 UGT2A3Q6UWM9 527 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 ISLR2Q6UXK2 745 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 MFN1Q8IWA4 741 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 TMA16Q96EY4 203 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 BTBD9Q96Q07 612 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 NDNQ99608 321 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 AP5M1Q9H0R1 490 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 DMAP1Q9NPF5 467 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 RBM22Q9NW64 420 aaKnown RBP eCLIP20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 ARHGEF38Q9NXL2 777 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 NUDT5Q9UKK9 219 aa20.44■□□□□ 0.86
SHKBP1-225ENST00000600733 TCAF2A6NFQ2 919 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 IRAK2O43187 625 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 PIM1P11309 404 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 TCN1P20061 433 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 MAP2K5Q13163 448 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 ZNF789Q5FWF6 425 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 MORN1Q5T089 497 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 RBM20Q5T481 1227 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CNSTQ6PJW8 725 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 POTEHQ6S545 545 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 TRIM67Q6ZTA4 783 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 RPS27LQ71UM5 84 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 LRRTM3Q86VH5 581 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 C2CD4AQ8NCU7 369 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 FAM156AQ8NDB6 213 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 MRGPRX2Q96LB1 330 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 UBE2OQ9C0C9 1292 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 COPS7BQ9H9Q2 264 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 EFCAB1Q9HAE3 211 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CYP4F12Q9HCS2 524 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 TREX1Q9NSU2 369 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 GTSE1Q9NYZ3 720 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 NCKIPSDQ9NZQ3 722 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 VPS28Q9UK41 221 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 FBXO5Q9UKT4 447 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 C15orf38-AP3S2A0A0A6YYH1 394 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 SDHDO14521 159 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 KIF3CO14782 793 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 B3GAT3O94766 335 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 HOXC8P31273 242 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CD151P48509 253 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CHN2P52757 468 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 PURAQ00577 322 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 EIF4EBP2Q13542 120 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CSHL1Q14406 222 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 PCSK7Q16549 785 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 FAM171BQ6P995 826 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 ARPINQ7Z6K5 226 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 RNF135Q8IUD6 432 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 LILRA2Q8N149 483 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 ZFAND2BQ8WV99 257 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 FCRL2Q96LA5 508 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 KATNAL1Q9BW62 490 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 MPP6Q9NZW5 540 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 CLEC11AQ9Y240 323 aa20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 COL4A4P53420 1690 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-225ENST00000600733 TADA2AO75478 443 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ODC1P11926 461 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 KCNA5P22460 613 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ADSLP30566 484 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 GEMP55040 296 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 HERC3Q15034 1050 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 FSCN1Q16658 493 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ARTNQ5T4W7 220 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 FAM219BQ5XKK7 198 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 OR10T2Q8NGX3 314 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 PDCD6IPQ8WUM4 868 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 LRGUKQ96M69 825 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 MRPL57Q9BQC6 102 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 TNFRSF12AQ9NP84 129 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 RIMS3Q9UJD0 308 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 PCDHGB4Q9UN71 923 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 PCDHGB5Q9Y5G0 923 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 M0QZ92 97 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 NPHS1O60500 1241 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 MOCS2O96007 188 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 POMCP01189 267 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 CPB1P15086 417 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ME2P23368 584 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms