RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PCOLCE2Q9UKZ9 415 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 ZFR2Q9UPR6 939 aaKnown RBP22.92■■□□□ 1.26
CCDC9-204ENST00000599398 FADS3Q9Y5Q0 445 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 SSU72P8A0A1W2PR75 194 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 MAGEC1O60732 1142 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 H2AFZP0C0S5 128 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 AKT2P31751 481 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 NXPH1P58417 271 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 RPS21P63220 83 aaKnown RBP22.91■■□□□ 1.26
CCDC9-204ENST00000599398 TXNRD3NBQ6F5E7 133 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 H2AFVQ71UI9 128 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 ARHGAP12Q8IWW6 846 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 TEKT4Q8WW24 435 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 TRIM5Q9C035 493 aa22.91■■□□□ 1.26
CCDC9-204ENST00000599398 ACACBO00763 2458 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 A0A1B0GTQ1 180 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 AP1G1O43747 822 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 PALMO75781 387 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 HNRNPA2B1P22626 353 aaKnown RBP22.9■■□□□ 1.26
CCDC9-204ENST00000599398 AMPD1P23109 780 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 GJC1P36383 396 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 ABL2P42684 1182 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 SLC25A11Q02978 314 aaKnown RBP22.9■■□□□ 1.26
CCDC9-204ENST00000599398 KRT81Q14533 505 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 HADHQ16836 314 aaKnown RBP22.9■■□□□ 1.26
CCDC9-204ENST00000599398 AFMIDQ63HM1 303 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 KIAA1161Q6NSJ0 714 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 POLNQ7Z5Q5 900 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 IQCHQ86VS3 1027 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 LZTR1Q8N653 840 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 RAB7BQ96AH8 199 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 KLHDC7BQ96G42 594 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 CCDC42Q96M95 316 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 CSPG4P5Q96PW8 444 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 PCDH18Q9HCL0 1135 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 UVRAGQ9P2Y5 699 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 BTBD3Q9Y2F9 522 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 MFHAS1Q9Y4C4 1052 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 CHD8Q9HCK8 2581 aa22.9■■□□□ 1.26
CCDC9-204ENST00000599398 INSIG1O15503 277 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 PCDHGA12O60330 932 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 CBFA2T3O75081 653 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 ARRB1P49407 418 aaPredicted RBP22.89■■□□□ 1.25
CCDC9-204ENST00000599398 OVGP1Q12889 678 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 ASTE1Q2TB18 679 aaPredicted RBP22.89■■□□□ 1.25
CCDC9-204ENST00000599398 TMEM259Q4ZIN3 620 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 LRRC73Q5JTD7 316 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 TMCO3Q6UWJ1 677 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 DBX2Q6ZNG2 339 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 ARHGAP36Q6ZRI8 547 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 TTC7BQ86TV6 843 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 CNGA4Q8IV77 575 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 TMEM145Q8NBT3 493 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 CHP1Q99653 195 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 SLC17A9Q9BYT1 436 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 ETNK2Q9NVF9 386 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 ITM2BQ9Y287 266 aa22.89■■□□□ 1.25
CCDC9-204ENST00000599398 AKR1B15C9JRZ8 316 aaPredicted RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 TSPAN6O43657 245 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 PIGNO95427 931 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 XPAP23025 273 aaPredicted RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 GRK6P43250 576 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 CDH6P55285 790 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 SHC2P98077 582 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 SGCGQ13326 291 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 INAVAQ3KP66 663 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 SPATS2Q86XZ4 545 aaKnown RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 GATAD2AQ86YP4 633 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 TP53INP2Q8IXH6 220 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 VOPP1Q96AW1 172 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 CNTNAP3BQ96NU0 1288 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 CINPQ9BW66 212 aaPredicted RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 CNTNAP3Q9BZ76 1288 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 NHEJ1Q9H9Q4 299 aaPredicted RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 SPTLC3Q9NUV7 552 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 IPO11Q9UI26 975 aaKnown RBP22.88■■□□□ 1.25
CCDC9-204ENST00000599398 GGT7Q9UJ14 662 aa22.88■■□□□ 1.25
CCDC9-204ENST00000599398 YKT6O15498 198 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 PROSCO94903 275 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 TOP3BO95985 862 aaKnown RBP22.87■■□□□ 1.25
CCDC9-204ENST00000599398 PAK4O96013 591 aaPredicted RBP22.87■■□□□ 1.25
CCDC9-204ENST00000599398 ITGAVP06756 1048 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 THEGLP0DJG4 465 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 SPINK2P20155 84 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 CLDN2P57739 230 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 IL10RBQ08334 325 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 GRM3Q14832 879 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 SARM1Q6SZW1 724 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 CPNE8Q86YQ8 564 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 OXR1Q8N573 874 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 TSEN2Q8NCE0 465 aaKnown RBP22.87■■□□□ 1.25
CCDC9-204ENST00000599398 CDC6Q99741 560 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 CPEB1Q9BZB8 566 aaKnown RBP22.87■■□□□ 1.25
CCDC9-204ENST00000599398 ERVMER34-1Q9H9K5 563 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 CEP295Q9C0D2 2601 aa22.87■■□□□ 1.25
CCDC9-204ENST00000599398 ANKRD36A6QL64 1941 aa22.86■■□□□ 1.25
CCDC9-204ENST00000599398 IGLON5A6NGN9 336 aa22.86■■□□□ 1.25
CCDC9-204ENST00000599398 TMEM110-MUSTN1A8MSY1 372 aa22.86■■□□□ 1.25
CCDC9-204ENST00000599398 TMEM253P0C7T8 217 aa22.86■■□□□ 1.25
CCDC9-204ENST00000599398 FTH1P19P0C7X4 201 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms