RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 LAMC2Q13753 1193 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 CEACAM7Q14002 265 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 PCBP1Q15365 356 aaKnown RBP eCLIP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 PSMD5Q16401 504 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 UGP2Q16851 508 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 LRRC36Q1X8D7 754 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 SOWAHAQ2M3V2 549 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ZNF618Q5T7W0 954 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ITPRIPL1Q6GPH6 555 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 DPH6Q7L8W6 267 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ACOT1Q86TX2 421 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ERI1Q8IV48 349 aaKnown RBP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 CROCCP3Q8IVE0 287 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 C12orf29Q8N999 325 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 BEST2Q8NFU1 509 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ZFP28Q8NHY6 868 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 HM13Q8TCT9 377 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 RNF139Q8WU17 664 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 KCTD13Q8WZ19 329 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ZNF669Q96BR6 464 aaPredicted RBP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 NMD3Q96D46 503 aaKnown RBP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ASB9Q96DX5 294 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ZNF597Q96LX8 424 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 BIRC8Q96P09 236 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 AGAP3Q96P47 875 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 SLC2A13Q96QE2 648 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 NPY6RQ99463 290 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 LGMNQ99538 433 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 KIFC1Q9BW19 673 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 OSBPL11Q9BXB4 747 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 FTHL17Q9BXU8 183 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 ACE2Q9BYF1 805 aaPredicted RBP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 RHOJQ9H4E5 214 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 WDR41Q9HAD4 459 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 SLC28A3Q9HAS3 691 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 SETD4Q9NVD3 440 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 GDAP2Q9NXN4 497 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 TUBA8Q9NY65 449 aaPredicted RBP8.69□□□□□ -1.02
SIN3B-208ENST00000596638 SLC17A6Q9P2U8 582 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 EPS15L1Q9UBC2 864 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 TLK1Q9UKI8 766 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 VANGL2Q9ULK5 521 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 CEPT1Q9Y6K0 416 aa8.69□□□□□ -1.02
SIN3B-208ENST00000596638 MYO9BQ13459 2157 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 A0A087WZ62 844 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 TCAF2A6NFQ2 919 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 C9IYK1 514 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CACNG3O60359 315 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 TSPAN1O60635 241 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 OR6B1O95007 311 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 BMP10O95393 424 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 PIGNO95427 931 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CXCL10P02778 98 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CA3P07451 260 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 FAM200BP0CF97 657 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 ZNF26P17031 533 aaPredicted RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 TFE3P19532 575 aaPredicted RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 MPSTP25325 297 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 PTPN3P26045 913 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 GRIA4P48058 902 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 SULT1E1P49888 294 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CDK9P50750 372 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 ATP4BP51164 291 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 KPNA2P52292 529 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CRADDP78560 199 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 DEFB103AP81534 67 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CDC42EP1Q00587 391 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 MS4A2Q01362 244 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 RHDQ02161 417 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 ILF2Q12905 390 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 SEMA3BQ13214 749 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 ART3Q13508 389 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 DCTN2Q13561 401 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 SLC12A1Q13621 1099 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 TRIM25Q14258 630 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 MFSD10Q14728 455 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 RAB30Q15771 203 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 DGKDQ16760 1214 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 MGAT5BQ3V5L5 792 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 SPATS1Q496A3 300 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 PID1Q7Z2X4 250 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CMC1Q7Z7K0 106 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 LINC00523Q86TU6 105 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 CNTN4Q8IWV2 1026 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 RBM12BQ8IXT5 1001 aaKnown RBP8.68□□□□□ -1.02
SIN3B-208ENST00000596638 DEFB106AQ8N104 65 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 LSMEM2Q8N112 164 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 LILRA2Q8N149 483 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 NUP93Q8N1F7 819 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 PELI3Q8N2H9 469 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 LRRC43Q8N309 656 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 METTL25Q8N6Q8 603 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 KDM1BQ8NB78 822 aa8.68□□□□□ -1.02
SIN3B-208ENST00000596638 GOLM1Q8NBJ4 401 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms