RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PREBQ9HCU5 417 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 TXNRD2Q9NNW7 524 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 C7orf72A4D263 438 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 KCNU1A8MYU2 1149 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 HNRNPRO43390 633 aaKnown RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 FYNP06241 537 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GLRBP48167 497 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 DAOAP59103 153 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 POU4F1Q01851 419 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 REP15Q6BDI9 236 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 POTEHQ6S545 545 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GK5Q6ZS86 529 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 AMIGO2Q86SJ2 522 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 SPPL2BQ8TCT7 592 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 NXNL1Q96CM4 212 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 PPP1R36Q96LQ0 422 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 CCT7Q99832 543 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 ANKRD60Q9BZ19 345 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 COQ10BQ9H8M1 238 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 CACNA2D2Q9NY47 1150 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 MIA3Q5JRA6 1907 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 E7ENX8 843 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 H3BRB1 525 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 ZNF701M0R085 212 aaPredicted RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 ANXA9O76027 345 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 PYGLP06737 847 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 HOXD8P13378 290 aaPredicted RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 TPH1P17752 444 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 PTPN1P18031 435 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 MSX2P35548 267 aaPredicted RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 PFKPQ01813 784 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 EN1Q05925 392 aaPredicted RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 DGKDQ16760 1214 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 Q3C1V9 767 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 KCTD21Q4G0X4 260 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 CCNYL1Q8N7R7 359 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 GOLM1Q8NBJ4 401 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 TXNDC5Q8NBS9 432 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 PPHLN1Q8NEY8 458 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 LPGAT1Q92604 370 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 DNAJC1Q96KC8 554 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 FCRL5Q96RD9 977 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 TBL1YQ9BQ87 522 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 TUT1Q9H6E5 874 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 SPAG4Q9NPE6 437 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 CNGB3Q9NQW8 809 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 ARMC1Q9NVT9 282 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 IRAK4Q9NWZ3 460 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
VRK3-209ENST00000594948 SLC8A2Q9UPR5 921 aa13.38□□□□□ -0.27
VRK3-209ENST00000594948 A0A0J9YVX5 310 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 RRN3P2A6NIE6 340 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 H3BSA7 217 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 STAMBPO95630 424 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 SNRPB2P08579 225 aaKnown RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 BMP2P12643 396 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 PAMP19021 973 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 CCNCP24863 283 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 CD151P48509 253 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ACADVLP49748 655 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 EMP3P54852 163 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 FASTKQ14296 549 aaKnown RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 TECRLQ5HYJ1 363 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 KIAA0930Q6ICG6 404 aaPredicted RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 PPP4R4Q6NUP7 873 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 CNSTQ6PJW8 725 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 KIAA0408Q6ZU52 694 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 HFE2Q6ZVN8 426 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 CROCCP3Q8IVE0 287 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 C2CD4AQ8NCU7 369 aaPredicted RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms