RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 PCID2Q5JVF3 399 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 PKN3Q6P5Z2 889 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
LIG1-206ENST00000594067 NPAS2Q99743 824 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 TBL1YQ9BQ87 522 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 WDR41Q9HAD4 459 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 VTI1BQ9UEU0 232 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 SLC2A6Q9UGQ3 507 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 FIS1Q9Y3D6 152 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 HHLA1C9JL84 531 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 CAPN15O75808 1086 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 TCN1P20061 433 aaPredicted RBP16.69■□□□□ 0.26
LIG1-206ENST00000594067 CLCN2P51788 898 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 PRKAA2P54646 552 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 RAB10P61026 200 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 APOFQ13790 326 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 EML3Q32P44 896 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 C6orf52Q5T4I8 152 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 TSTD2Q5T7W7 516 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 KDELC2Q7Z4H8 507 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 PGAM4Q8N0Y7 254 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 CATSPER1Q8NEC5 780 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 TMA16Q96EY4 203 aaKnown RBP16.69■□□□□ 0.26
LIG1-206ENST00000594067 TSPAN18Q96SJ8 248 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 FICDQ9BVA6 458 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 SUDS3Q9H7L9 328 aaPredicted RBP16.69■□□□□ 0.26
LIG1-206ENST00000594067 DMTF1Q9Y222 760 aa16.69■□□□□ 0.26
LIG1-206ENST00000594067 COPG1Q9Y678 874 aaKnown RBP16.69■□□□□ 0.26
LIG1-206ENST00000594067 F9P00740 461 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 CREB5Q02930 508 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
LIG1-206ENST00000594067 FAM156AQ8NDB6 213 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ZNF419Q96HQ0 510 aaPredicted RBP16.68■□□□□ 0.26
LIG1-206ENST00000594067 GPR78Q96P69 363 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 PKP2Q99959 881 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ZBTB26Q9HCK0 441 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 PRSS51A0A1B0GVH4 220 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 STMN1P16949 149 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 PCSK6P29122 969 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 CLCNKBP51801 687 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 HK2P52789 917 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ADAM17P78536 824 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 HPCAP84074 193 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 GRB14Q14449 540 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 KDM1BQ8NB78 822 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 C3orf58Q8NDZ4 430 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ELMO2Q96JJ3 720 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 ATXN3LQ9H3M9 355 aa16.68■□□□□ 0.26
LIG1-206ENST00000594067 NEMP2A6NFY4 417 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 SLCO1B7G3V0H7 640 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 CDK4P11802 303 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 ME2P23368 584 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 ARNTP27540 789 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 PSEN2P49810 448 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 SH2D4BQ5SQS7 431 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 PM20D1Q6GTS8 502 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 EFCAB1Q9HAE3 211 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 GTSE1Q9NYZ3 720 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 AAR2Q9Y312 384 aaKnown RBP16.67■□□□□ 0.26
LIG1-206ENST00000594067 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIG1-206ENST00000594067 ARSAP15289 507 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 SLC1A2P43004 574 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 ARCN1P48444 511 aaKnown RBP16.67■□□□□ 0.26
LIG1-206ENST00000594067 LHX1P48742 406 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
LIG1-206ENST00000594067 UGP2Q16851 508 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 LDLRAD1Q5T700 205 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 DENND5AQ6IQ26 1287 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 DCLRE1AQ6PJP8 1040 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 GK5Q6ZS86 529 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 TXNDC5Q8NBS9 432 aaKnown RBP16.67■□□□□ 0.26
LIG1-206ENST00000594067 FAM210AQ96ND0 272 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 GAD1Q99259 594 aa16.67■□□□□ 0.26
LIG1-206ENST00000594067 BPTFQ12830 3046 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 CCL15-CCL14A0A0B4J2E2 113 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 TCAF2A6NFQ2 919 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 AP3B1O00203 1094 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 SLC22A2O15244 555 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 PSMD3O43242 534 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 PMPCBO75439 489 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 MYL3P08590 195 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 COL6A2P12110 1019 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 TAS2R39P59534 338 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 COG7P83436 770 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 CCL15Q16663 113 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 BORAQ6PGQ7 559 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 ALDH16A1Q8IZ83 802 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 PPHLN1Q8NEY8 458 aaKnown RBP16.66■□□□□ 0.26
LIG1-206ENST00000594067 DDI1Q8WTU0 396 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 HEXDCQ8WVB3 486 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 SLC2A11Q9BYW1 496 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 POMKQ9H5K3 350 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms