RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 KLHDC7AQ5VTJ3 777 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 RWDD4Q6NW29 188 aaKnown RBP17.75■□□□□ 0.43
RETREG3-212ENST00000593251 ARHGEF2Q92974 986 aaKnown RBP17.75■□□□□ 0.43
RETREG3-212ENST00000593251 VOPP1Q96AW1 172 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 KLHL32Q96NJ5 620 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 TUBGCP2Q9BSJ2 902 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 SEMA4CQ9C0C4 833 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 PPARGC1AQ9UBK2 798 aaKnown RBP17.75■□□□□ 0.43
RETREG3-212ENST00000593251 OR12D3Q9UGF7 316 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 SALL4Q9UJQ4 1053 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 FAM72CH0Y354 149 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 PES1O00541 588 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 LZTS3O60299 673 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 RBMS1P29558 406 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 IGFALSP35858 605 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 THOP1P52888 689 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 ADKP55263 362 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 RHDQ02161 417 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 LY6DQ14210 128 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 NR0B2Q15466 257 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 PRRT3Q5FWE3 981 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 FAM72AQ5TYM5 149 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 SMYD5Q6GMV2 418 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 FAM72DQ6L9T8 149 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 VPS36Q86VN1 386 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 FAM72BQ86X60 149 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 SLC35F3Q8IY50 421 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 MLKLQ8NB16 471 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 NETO2Q8NC67 525 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 RAB7BQ96AH8 199 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 ISG20Q96AZ6 181 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 SYNDIG1Q9H7V2 258 aa17.74■□□□□ 0.43
RETREG3-212ENST00000593251 APOBEC3BQ9UH17 382 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 FLNBO75369 2602 aaKnown RBP17.74■□□□□ 0.43
RETREG3-212ENST00000593251 COL6A6A6NMZ7 2263 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 MMP20O60882 483 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 GJB6O95452 261 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 LSM8O95777 96 aaKnown RBP17.73■□□□□ 0.43
RETREG3-212ENST00000593251 ITIH2P19823 946 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 ADRA1BP35368 520 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 POLD3Q15054 466 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-212ENST00000593251 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 RBM44Q6ZP01 1051 aaKnown RBP17.73■□□□□ 0.43
RETREG3-212ENST00000593251 NLRP14Q86W24 1093 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 FAM114A1Q8IWE2 563 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 PHACTR4Q8IZ21 702 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 MSANTD4Q8NCY6 345 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 DENND6BQ8NEG7 585 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 OR2AP1Q8NGE2 309 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 SLC20A1Q8WUM9 679 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 BTN2A2Q8WVV5 523 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 CENPTQ96BT3 561 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 PRR11Q96HE9 360 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-212ENST00000593251 SLC46A1Q96NT5 459 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 LRRC61Q9BV99 259 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 BOCQ9BWV1 1114 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
RETREG3-212ENST00000593251 DPH1Q9BZG8 443 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 TMEM51Q9NW97 253 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 NCKIPSDQ9NZQ3 722 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 SPASTQ9UBP0 616 aa17.73■□□□□ 0.43
RETREG3-212ENST00000593251 TPP1O14773 563 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 GSRP00390 522 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 CELA2BP08218 269 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-212ENST00000593251 UCHL3P15374 230 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 RHOQP17081 205 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 ETFBP38117 255 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 MAPKAPK2P49137 400 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 SNRPD1P62314 119 aaKnown RBP17.72■□□□□ 0.43
RETREG3-212ENST00000593251 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
RETREG3-212ENST00000593251 VAC14Q08AM6 782 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 TCEA2Q15560 299 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 MYLK3Q32MK0 819 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 PLPP6Q8IY26 295 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 JOSD2Q8TAC2 188 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 EPS8L1Q8TE68 723 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 ASB12Q8WXK4 309 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 CLPBQ9H078 707 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 MBNL1Q9NR56 388 aaKnown RBP17.72■□□□□ 0.43
RETREG3-212ENST00000593251 TMEM248Q9NWD8 314 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 HPCAL4Q9UM19 191 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 NEU3Q9UQ49 428 aa17.72■□□□□ 0.43
RETREG3-212ENST00000593251 F8VZ95 297 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 AREL1O15033 823 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 LRIG2O94898 1065 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 POP4O95707 220 aaKnown RBP17.71■□□□□ 0.43
RETREG3-212ENST00000593251 ANXA6P08133 673 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 PTK2BQ14289 1009 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 ARL13BQ3SXY8 428 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 C6orf132Q5T0Z8 1188 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 FAXCQ5TGI0 409 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 KIAA1614Q5VZ46 1190 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 IGF2-ASQ6U949 168 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 GDPD4Q6W3E5 623 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 ARCQ7LC44 396 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 TTC7BQ86TV6 843 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms