RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CHCHD4Q8N4Q1 142 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 CASKIN2Q8WXE0 1202 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 GDAP1L1Q96MZ0 367 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 PANX2Q96RD6 677 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ETNK2Q9NVF9 386 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 INTUQ9ULD6 942 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TFR2Q9UP52 801 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 BTBD3Q9Y2F9 522 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 DOCK4Q8N1I0 1966 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 NYNRINQ9P2P1 1898 aaKnown RBP14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ASPMQ8IZT6 3477 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 CABIN1Q9Y6J0 2220 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 C1QTNF9BB2RNN3 333 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PRAMEF11O60813 436 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 UGT2B4P06133 528 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 KRT7P08729 469 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 C1QTNF9P0C862 333 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 TNNT1P13805 278 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 MAT2AP31153 395 aaKnown RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 NOP2P46087 812 aaKnown RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 NEK3P51956 506 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 ST3GAL2Q16842 350 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 INO80DQ53TQ3 878 aaPredicted RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PIP5KL1Q5T9C9 394 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 AFMIDQ63HM1 303 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 ERN2Q76MJ5 926 aaKnown RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 RAB44Q7Z6P3 723 aaPredicted RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 ADAT2Q7Z6V5 191 aaKnown RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 GLRX5Q86SX6 157 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 SLCO6A1Q86UG4 719 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 LZTR1Q8N653 840 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PNPLA1Q8N8W4 532 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 BAHD1Q8TBE0 780 aaPredicted RBP14.13□□□□□ -0.15
CLIP3-205ENST00000592017 SERAC1Q96JX3 654 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 KDM4CQ9H3R0 1056 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PDFQ9HBH1 243 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 AASDHPPTQ9NRN7 309 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 HYOU1Q9Y4L1 999 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PCDHB9Q9Y5E1 797 aa14.13□□□□□ -0.15
CLIP3-205ENST00000592017 PALMO75781 387 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 MTA2O94776 668 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 FTH1P19P0C7X4 201 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 ITGB7P26010 798 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 CD38P28907 300 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 SERPINB6P35237 376 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 C21orf59P57076 290 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 IL9RQ01113 521 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 RAD51Q06609 339 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 CCDC15Q0P6D6 951 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 DPYSL3Q14195 570 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 CYTH1Q15438 398 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 SHBQ15464 509 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 MYLK3Q32MK0 819 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 PARS2Q7L3T8 475 aaKnown RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 PRPF39Q86UA1 669 aaKnown RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 PLPP6Q8IY26 295 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 ATPAF2Q8N5M1 289 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 RHBDD1Q8TEB9 315 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 TSC1Q92574 1164 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 GATA6Q92908 595 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 CINPQ9BW66 212 aaPredicted RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 RCOR3Q9P2K3 495 aaPredicted RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 LHX3Q9UBR4 397 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
CLIP3-205ENST00000592017 KLK13Q9UKR3 277 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 NEUROG3Q9Y4Z2 214 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 PCDHA13Q9Y5I0 950 aa14.12□□□□□ -0.15
CLIP3-205ENST00000592017 A0A1B0GTQ1 180 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TLR4O00206 839 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 INSIG1O15503 277 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 FLRT2O43155 660 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 SPOPO43791 374 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 MFSD11O43934 449 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PCDHGA12O60330 932 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 RNGTTO60942 597 aaKnown RBP14.11□□□□□ -0.15
CLIP3-205ENST00000592017 KRT37O76014 449 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PCDH8O95206 1070 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 NDUFA10O95299 355 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TRIM16O95361 564 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PIGNO95427 931 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 POP4O95707 220 aaKnown RBP14.11□□□□□ -0.15
CLIP3-205ENST00000592017 KRT1P04264 644 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PROS1P07225 676 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 ATXN1LP0C7T5 689 aaKnown RBP14.11□□□□□ -0.15
CLIP3-205ENST00000592017 ADRB3P13945 408 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 CDC25BP30305 580 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 ARHGAP25P42331 645 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 CCT8P50990 548 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 ARSEP51690 589 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 IL10RBQ08334 325 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 SUZ12Q15022 739 aaKnown RBP14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PDK2Q15119 407 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 NAPEPLDQ6IQ20 393 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 UNQ6494/PRO21346Q6UXR6 183 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms