RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CSF2P04141 144 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 GIMD1P0DJR0 217 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 EPHB2P29323 1055 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 EIF2S3P41091 472 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 ABL2P42684 1182 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 UBXN1Q04323 297 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 PDE1CQ14123 709 aaPredicted RBP18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 DNAJC24Q6P3W2 148 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 WDR59Q6PJI9 974 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 GDPD4Q6W3E5 623 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 PARGQ86W56 976 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 C3orf20Q8ND61 904 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 ASB12Q8WXK4 309 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 APOLD1Q96LR9 279 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 ABCG4Q9H172 646 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 USP29Q9HBJ7 922 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 GPR27Q9NS67 375 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 ANO10Q9NW15 660 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 LIMA1Q9UHB6 759 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 BPTFQ12830 3046 aa18.21■□□□□ 0.51
PRKCSH-211ENST00000590098 SIGLEC16A6NMB1 481 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 EIF4E1BA6NMX2 242 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 LGALS16A8MUM7 142 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 K7ESM1 405 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 TLX3O43711 291 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 OPA1O60313 960 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 BRINP1O60477 761 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 NEBLO76041 1014 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 GP1BAP07359 652 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 NME1P15531 152 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 DESP17661 470 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 MYL5Q02045 173 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 ATXN7L2Q5T6C5 722 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 TTC7BQ86TV6 843 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 RTL3Q8N8U3 475 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 FAM181AQ8N9Y4 354 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 DENND6BQ8NEG7 585 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 ZNF548Q8NEK5 533 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 CASKIN2Q8WXE0 1202 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 FGF11Q92914 225 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 GDAP1L1Q96MZ0 367 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 KLF6Q99612 283 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 NCKIPSDQ9NZQ3 722 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 ITM2BQ9Y287 266 aa18.2■□□□□ 0.5
PRKCSH-211ENST00000590098 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 CREB3O43889 395 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 TMCC1O94876 653 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 IGSF6O95976 241 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 MYF5P13349 255 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 JUNDP17535 347 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 ITPKBP27987 946 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 ACTN2P35609 894 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 ZNF143P52747 638 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 THOP1P52888 689 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 YBEYP58557 167 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 RHOAP61586 193 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 PTK2BQ14289 1009 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 INO80DQ53TQ3 878 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 ZCCHC8Q6NZY4 707 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 RBM43Q6ZSC3 357 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 PYROXD2Q8N2H3 581 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 BTN2A2Q8WVV5 523 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 DEPDC7Q96QD5 511 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 EPAS1Q99814 870 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 C1QTNF7Q9BXJ2 289 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 TTYH3Q9C0H2 523 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 CATSPERBQ9H7T0 1116 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 GGT7Q9UJ14 662 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 CSNK1G3Q9Y6M4 447 aa18.19■□□□□ 0.5
PRKCSH-211ENST00000590098 CCP110O43303 1012 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 AQP9O43315 295 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 PFN3P60673 137 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 STX1AQ16623 288 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 PARP15Q460N3 678 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 SNIP1Q8TAD8 396 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 IFI44Q8TCB0 444 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 MAPK15Q8TD08 544 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 LMX1AQ8TE12 382 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 CXorf40AQ8TE69 158 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 MCEEQ96PE7 176 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 CNPY3Q9BT09 278 aa18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 NOL6Q9H6R4 1146 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-211ENST00000590098 RIOK3O14730 519 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 AREL1O15033 823 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 MMP20O60882 483 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 TM7SF2O76062 418 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 XPAP23025 273 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 AIF1P55008 147 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 LRRC73Q5JTD7 316 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 CDCP2Q5VXM1 449 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 DCUN1D2Q6PH85 259 aa18.17■□□□□ 0.5
PRKCSH-211ENST00000590098 VPS36Q86VN1 386 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms