RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TBC1D3BA6NDS4 549 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 USP27XA6NNY8 438 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ACOT7O00154 380 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 SLU7O95391 586 aaKnown RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 LDOC1O95751 146 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ODC1P11926 461 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 CMA1P23946 247 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 TPMTP51580 245 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ITGA1P56199 1179 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 NLRP5P59047 1200 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 SRSF6Q13247 344 aaKnown RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 NOP9Q86U38 636 aaKnown RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ZC3H18Q86VM9 953 aaKnown RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 TRIM48Q8IWZ4 208 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 EID2Q8N6I1 236 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 AOPEPQ8N6M6 819 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 FBXO18Q8NFZ0 1043 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 RFFLQ8WZ73 363 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 EXTL1Q92935 676 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 SENP8Q96LD8 212 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 FAM20AQ96MK3 541 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF578Q96N58 590 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 HAPLN2Q9GZV7 340 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 HSD3B7Q9H2F3 369 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 C6orf106Q9H6K1 298 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 PLEKHB1Q9UF11 243 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-209ENST00000589941 HPSEQ9Y251 543 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 A0A1B0GTQ1 180 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 BECN2A8MW95 431 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 PAPSS1O43252 624 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CCP110O43303 1012 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 HCRTO43612 131 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 RNF224P0DH78 156 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CSH1P0DML2 217 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CSH2P0DML3 217 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CYP2F1P24903 491 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 ADAM9Q13443 819 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF460Q14592 562 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 SKIDA1Q1XH10 827 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 FUT11Q495W5 492 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
SMAD4-209ENST00000589941 SPOCD1Q6ZMY3 1216 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 TRMT11Q7Z4G4 463 aaKnown RBP8.13□□□□□ -1.11
SMAD4-209ENST00000589941 FAM124AQ86V42 546 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CHPFQ8IZ52 775 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 BLIDQ8IZY5 108 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 KRT222Q8N1A0 295 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 MCPH1Q8NEM0 835 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CADM4Q8NFZ8 388 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 SPPL2BQ8TCT7 592 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 WBP2Q969T9 261 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 ORAI3Q9BRQ5 295 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CFAP97Q9P2B7 532 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 TNPO3Q9Y5L0 923 aaKnown RBP8.13□□□□□ -1.11
SMAD4-209ENST00000589941 CPQQ9Y646 472 aa8.13□□□□□ -1.11
SMAD4-209ENST00000589941 APCP25054 2843 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 HIVEP1P15822 2718 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 FAM90A27PA6NNH2 459 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 SPTLC2O15270 562 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 ATP8B1O43520 1251 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 CCNT1O60563 726 aaKnown RBP8.12□□□□□ -1.11
SMAD4-209ENST00000589941 PPP6R2O75170 966 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 MCF2P10911 925 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 FAHP16930 419 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 HDCP19113 662 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 NDUFA8P51970 172 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 LILRA4P59901 499 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
SMAD4-209ENST00000589941 SLC39A14Q15043 492 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 TCEA2Q15560 299 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 ZBTB6Q15916 424 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 INAVAQ3KP66 663 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 OVCH1Q7RTY7 1134 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 TMEM151BQ8IW70 566 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 IGSF22Q8N9C0 903 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 SAP25Q8TEE9 199 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 P2RY11Q96G91 374 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 PPP1R13BQ96KQ4 1090 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 MTMR9Q96QG7 549 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 UBXN6Q9BZV1 441 aa8.12□□□□□ -1.11
SMAD4-209ENST00000589941 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-209ENST00000589941 TTC26A0AVF1 554 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-209ENST00000589941 MED24O75448 989 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 ZRANB2O95218 330 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMAD4-209ENST00000589941 MT-CO3P00414 261 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 WNT1P04628 370 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 C1SP09871 688 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 ME1P48163 572 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 TERF2Q15554 542 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 FBXO38Q6PIJ6 1188 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 LIPIQ6XZB0 460 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms