RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ECT2LQ008S8 904 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 RUNX3Q13761 415 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 GEN1Q17RS7 908 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 RALGPS1Q5JS13 557 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 CEP85LQ5SZL2 805 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 TMEM215Q68D42 235 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 MBLAC2Q68D91 279 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 KDELC2Q7Z4H8 507 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 RNF135Q8IUD6 432 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 CCNJLQ8IV13 435 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 RPL10LQ96L21 214 aaKnown RBP17.65■□□□□ 0.42
CXXC1-212ENST00000589940 IL22Q9GZX6 179 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 ARNT2Q9HBZ2 717 aa17.65■□□□□ 0.42
CXXC1-212ENST00000589940 SRCP12931 536 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 POLR2EP19388 210 aaKnown RBP17.64■□□□□ 0.42
CXXC1-212ENST00000589940 KCNA5P22460 613 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 STK19P49842 368 aaPredicted RBP17.64■□□□□ 0.42
CXXC1-212ENST00000589940 WFIKKN2Q8TEU8 576 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 MYLIPQ8WY64 445 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 CFAP36Q96G28 342 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 FEM1CQ96JP0 617 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 SH3GL2Q99962 352 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 RPP25Q9BUL9 199 aaKnown RBP17.64■□□□□ 0.42
CXXC1-212ENST00000589940 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.42
CXXC1-212ENST00000589940 UBE2ZQ9H832 354 aaPredicted RBP17.64■□□□□ 0.42
CXXC1-212ENST00000589940 SAMD15Q9P1V8 674 aa17.64■□□□□ 0.42
CXXC1-212ENST00000589940 LOC285095A0A1B0GVY8 99 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 GRXCR2A6NFK2 248 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 EPOP01588 193 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 GDI1P31150 447 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 CDK18Q07002 472 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 HTR4Q13639 388 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 CERCAMQ5T4B2 595 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 SH2D3CQ8N5H7 860 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 ISG20Q96AZ6 181 aaKnown RBP17.64■□□□□ 0.41
CXXC1-212ENST00000589940 IFT43Q96FT9 208 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 NSMCE3Q96MG7 304 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 DEC1Q9P2X7 70 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 NUMBLQ9Y6R0 609 aa17.64■□□□□ 0.41
CXXC1-212ENST00000589940 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 OPA1O60313 960 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 ZNF821O75541 412 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 GSTA2P09210 222 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 TPH1P17752 444 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 PGAM1P18669 254 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SP100P23497 879 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CHRNA4P43681 627 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SMAD4Q13485 552 aaKnown RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 STAT4Q14765 748 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SLC1A5Q15758 541 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CCDC85BQ15834 202 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 ATXN7L2Q5T6C5 722 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 NCEH1Q6PIU2 408 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 UNC5AQ6ZN44 842 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 PRUNE2Q8WUY3 3088 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CDX2Q99626 313 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CCDC77Q9BR77 488 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 TMEM109Q9BVC6 243 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 TM6SF2Q9BZW4 377 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CEP44Q9C0F1 390 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 PLAC1Q9HBJ0 212 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 MED4Q9NPJ6 270 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 GTSE1Q9NYZ3 720 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 MAGEB16A2A368 324 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SLC6A11P48066 632 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 CSNK1DP48730 415 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 AP1S1P61966 158 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 GRAMD4Q6IC98 578 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SRLQ86TD4 932 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 GOLGA6L1Q8N7Z2 621 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 TRIM56Q9BRZ2 755 aaKnown RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 FAM53CQ9NYF3 392 aa17.63■□□□□ 0.41
CXXC1-212ENST00000589940 ARIH1Q9Y4X5 557 aaPredicted RBP17.63■□□□□ 0.41
CXXC1-212ENST00000589940 TCRBV9S1A1TA0A576 114 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ATP9BO43861 1147 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 TCEA3O75764 348 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 SYF2O95926 243 aaKnown RBP17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ATXN1LP0C7T5 689 aaKnown RBP17.62■□□□□ 0.41
CXXC1-212ENST00000589940 HLA-DPA1P20036 260 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 GJA4P35212 333 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 MAPK8P45983 427 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 KRT71Q3SY84 523 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 HSP90B2PQ58FF3 399 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 DGKKQ5KSL6 1271 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 STEAP4Q687X5 459 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 GPR153Q6NV75 609 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 C22orf39Q6P5X5 142 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 Q7L0L9 218 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 FBF1Q8TES7 1133 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 TRIB3Q96RU7 358 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 TDRD1Q9BXT4 1180 aaKnown RBP17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ROPN1BQ9BZX4 212 aaPredicted RBP17.62■□□□□ 0.41
CXXC1-212ENST00000589940 CIPCQ9C0C6 399 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ROPN1Q9HAT0 212 aaPredicted RBP17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ERVW-1Q9UQF0 538 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 GOLGA6L10A6NI86 522 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ARNTLO00327 626 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 IGSF6O95976 241 aa17.62■□□□□ 0.41
CXXC1-212ENST00000589940 ASLP04424 464 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms