RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 GPR27Q9NS67 375 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 KLF15Q9UIH9 416 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 PNMA8BQ9ULN7 279 aaPredicted RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 CASC3O15234 703 aaKnown RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 AP1G1O43747 822 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 PIAS2O75928 621 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 TCF4P15884 667 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 IGFALSP35858 605 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 ETFBP38117 255 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 RGRP47804 291 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 SEMG2Q02383 582 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 SERINC3Q13530 473 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 ASIC2Q16515 512 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 COL28A1Q2UY09 1125 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 MYLK3Q32MK0 819 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 ZNF805Q5CZA5 627 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 DCUN1D2Q6PH85 259 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 NPWQ8N729 165 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 WRAP53Q9BUR4 548 aaKnown RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 TTYH3Q9C0H2 523 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 TCEAL2Q9H3H9 227 aaPredicted RBP12.85□□□□□ -0.35
RFX1-207ENST00000589937 KLHL11Q9NVR0 708 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 PCSK1NQ9UHG2 260 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 AP4E1Q9UPM8 1137 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 COQ6Q9Y2Z9 468 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 U3KQA8 63 aa12.85□□□□□ -0.35
RFX1-207ENST00000589937 J3KR12 359 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFX1-207ENST00000589937 NEMP1O14524 444 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 AREL1O15033 823 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 MAGEC1O60732 1142 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 PRKCGP05129 697 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 SKILP12757 684 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 CKMT2P17540 419 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 PSMA2P25787 234 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 TPI1P60174 286 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 RHOAP61586 193 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 SNRPD1P62314 119 aaKnown RBP12.84□□□□□ -0.35
RFX1-207ENST00000589937 INSM1Q01101 510 aaPredicted RBP12.84□□□□□ -0.35
RFX1-207ENST00000589937 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFX1-207ENST00000589937 CYTH1Q15438 398 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 TCEA2Q15560 299 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 GDPD4Q6W3E5 623 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 ARHGAP36Q6ZRI8 547 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 VPS36Q86VN1 386 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 RBFAQ8N0V3 343 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 ZNF548Q8NEK5 533 aaPredicted RBP12.84□□□□□ -0.35
RFX1-207ENST00000589937 OR4C6Q8NH72 309 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
RFX1-207ENST00000589937 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 EPAS1Q99814 870 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 BPIFA3Q9BQP9 254 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 C1QTNF2Q9BXJ5 285 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 DHX35Q9H5Z1 703 aaKnown RBP12.84□□□□□ -0.35
RFX1-207ENST00000589937 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 LRRC19Q9H756 370 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 PCDHGA1Q9Y5H4 931 aa12.84□□□□□ -0.35
RFX1-207ENST00000589937 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 MMP20O60882 483 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 IGSF6O95976 241 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 GEMIN4P57678 1058 aaKnown RBP12.83□□□□□ -0.36
RFX1-207ENST00000589937 EIF2B5Q13144 721 aaKnown RBP12.83□□□□□ -0.36
RFX1-207ENST00000589937 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
RFX1-207ENST00000589937 IQCB1Q15051 598 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 ARHGAP12Q8IWW6 846 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 UMODL1-AS1Q8N2C9 162 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 ZNF653Q96CK0 615 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 NSMCE3Q96MG7 304 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 MBNL1Q9NR56 388 aaKnown RBP12.83□□□□□ -0.36
RFX1-207ENST00000589937 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
RFX1-207ENST00000589937 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
RFX1-207ENST00000589937 WASH4PA8MWX3 477 aa12.82□□□□□ -0.36
RFX1-207ENST00000589937 SCAMP1O15126 338 aa12.82□□□□□ -0.36
RFX1-207ENST00000589937 TSPAN6O43657 245 aa12.82□□□□□ -0.36
RFX1-207ENST00000589937 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
RFX1-207ENST00000589937 POP4O95707 220 aaKnown RBP12.82□□□□□ -0.36
RFX1-207ENST00000589937 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
RFX1-207ENST00000589937 JUPP14923 745 aa12.82□□□□□ -0.36
RFX1-207ENST00000589937 TIMP2P16035 220 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms