RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 ATP13A3Q9H7F0 1226 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 FBXL12Q9NXK8 326 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 SMARCAL1Q9NZC9 954 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 USP36Q9P275 1121 aaKnown RBP22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 KLHL8Q9P2G9 620 aaPredicted RBP22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 SERGEFQ9UGK8 458 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 PPM1HQ9ULR3 514 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 PCDHGA2Q9Y5H1 932 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 R4GN57 208 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 SPTBN4Q9H254 2564 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 CACNA1HO95180 2353 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 PGRMC1O00264 195 aaKnown RBP22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 KCNN4O15554 427 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 ZNF217O75362 1048 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 RPP40O75818 363 aaKnown RBP22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 STK10O94804 968 aaKnown RBP22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 TCP1P17987 556 aaKnown RBP22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 SERPINA4P29622 427 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 MAPK8P45983 427 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 TPMTP51580 245 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 DSC2Q02487 901 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 SNX1Q13596 522 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 ZC3H14Q6PJT7 736 aaKnown RBP22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 GDPD4Q6W3E5 623 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 SYT10Q6XYQ8 523 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 CEP68Q76N32 757 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 TMIEQ8NEW7 156 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 C1orf54Q8WWF1 131 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 ARRDC3Q96B67 414 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 NUDCD1Q96RS6 583 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 IL12RB2Q99665 862 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 SEMA3CQ99985 751 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 OSBPL1AQ9BXW6 950 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 DNPEPQ9ULA0 475 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 SCML1Q9UN30 329 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 NCKAP1Q9Y2A7 1128 aa22.72■■□□□ 1.23
R3HDM4-205ENST00000589445 F5H423 210 aaPredicted RBP22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 ZNF185O15231 689 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 PTPN3P26045 913 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 CASQ1P31415 396 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 BYSLQ13895 437 aaKnown RBP22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 PARS2Q7L3T8 475 aaKnown RBP22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 FRMD1Q8N878 549 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 GAB3Q8WWW8 586 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 CAPZA3Q96KX2 299 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 KLHL32Q96NJ5 620 aa22.71■■□□□ 1.23
R3HDM4-205ENST00000589445 THADAQ6YHU6 1953 aa22.7■■□□□ 1.23
R3HDM4-205ENST00000589445 IGHV1OR15-9A0A0B4J2B8 117 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 MAP3K13O43283 966 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 LIASO43766 372 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 ITGB7P26010 798 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 P2RY2P41231 377 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 CSNK1DP48730 415 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 ETF1P62495 437 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 BCL2L1Q07817 233 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 CNTN1Q12860 1018 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 SFSWAPQ12872 951 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 GRM3Q14832 879 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 MAP7D1Q3KQU3 841 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 ERMP1Q7Z2K6 904 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 KBTBD6Q86V97 674 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 PDCD6IPQ8WUM4 868 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 NELL1Q92832 810 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 LRIG1Q96JA1 1093 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 TUBGCP5Q96RT8 1024 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 NAP1L3Q99457 506 aaPredicted RBP22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 NOD2Q9HC29 1040 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 AMACRQ9UHK6 382 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 SPAG17Q6Q759 2223 aa22.7■■□□□ 1.22
R3HDM4-205ENST00000589445 NUMA1Q14980 2115 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 PRR23AA6NEV1 266 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 FAM47DPA6NHR8 397 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 FANCGO15287 622 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 NDUFS2O75306 463 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 CR2P20023 1033 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 BCKDHBP21953 392 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 CD6P30203 668 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 DRD3P35462 400 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 NEK3P51956 506 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 NSUN2Q08J23 767 aaKnown RBP eCLIP22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 WASHC5Q12768 1159 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF805Q5CZA5 627 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 LRRC73Q5JTD7 316 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 PRR23BQ6ZRT6 265 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 USP30Q70CQ3 517 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 CAMK1DQ8IU85 385 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 RASGEF1CQ8N431 466 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 CNTD1Q8N815 330 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 ZBTB44Q8NCP5 570 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 SLC35B2Q8TB61 432 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 TOE1Q96GM8 510 aaKnown RBP22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 TMEM121Q9BTD3 319 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 FRMD8P1Q9BZ68 369 aaPredicted RBP22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 ITM2CQ9NQX7 267 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 RSPH14Q9UHP6 348 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 FZD4Q9ULV1 537 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 ATP8A1Q9Y2Q0 1164 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 SAR1BQ9Y6B6 198 aa22.69■■□□□ 1.22
R3HDM4-205ENST00000589445 PTPRZ1P23471 2315 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms