RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 DRD3P35462 400 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 TPMTP51580 245 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 DSC2Q02487 901 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SRSF5Q13243 272 aaKnown RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FAM46CQ5VWP2 391 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ALG1LQ6GMV1 187 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FAM160A2Q8N612 972 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FRMD1Q8N878 549 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 MAIP1Q8WWC4 291 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SEMA3CQ99985 751 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 NOD2Q9HC29 1040 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SCUBE2Q9NQ36 999 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ITM2CQ9NQX7 267 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SCML1Q9UN30 329 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SAR1BQ9Y6B6 198 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 MYO15AQ9UKN7 3530 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 KCNN4O15554 427 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ZNF217O75362 1048 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 PRLRP16471 622 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 CASQ1P31415 396 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 P2RY2P41231 377 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 AP1S1P61966 158 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 SNX1Q13596 522 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 OASLQ15646 514 aaKnown RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 MAP7D1Q3KQU3 841 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 TEX44Q53QW1 395 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 NCEH1Q6PIU2 408 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 GDPD4Q6W3E5 623 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FAM124AQ86V42 546 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ZNF567Q8N184 647 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ZBTB44Q8NCP5 570 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 ACTRT1Q8TDG2 376 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 GANCQ8TET4 914 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 LRIG1Q96JA1 1093 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 CAPZA3Q96KX2 299 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 TEKT5Q96M29 485 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 KLHL32Q96NJ5 620 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FRMD8P1Q9BZ68 369 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 CPEB1Q9BZB8 566 aaKnown RBP19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 USP29Q9HBJ7 922 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 FBXL12Q9NXK8 326 aa19.2■□□□□ 0.66
CLPTM1-209ENST00000588855 RNASEH2AO75792 299 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 CNTN1Q12860 1018 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 BYSLQ13895 437 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 IHHQ14623 411 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 GRM3Q14832 879 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 USP39Q53GS9 565 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 PARS2Q7L3T8 475 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 CAMK1DQ8IU85 385 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 HDDC3Q8N4P3 179 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 ARRDC2Q8TBH0 407 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 NKD2Q969F2 451 aaPredicted RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 TUBGCP5Q96RT8 1024 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 OMDQ99983 421 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 TMEM121Q9BTD3 319 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 ATP13A3Q9H7F0 1226 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 HAUS2Q9NVX0 235 aa19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 KLHL8Q9P2G9 620 aaPredicted RBP19.19■□□□□ 0.66
CLPTM1-209ENST00000588855 USP34Q70CQ2 3546 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 IGHV1OR15-9A0A0B4J2B8 117 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 IGLV3-19P01714 112 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 ITGB7P26010 798 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 CD68P34810 354 aaPredicted RBP19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 MAPK8P45983 427 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 GDF10P55107 478 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 CCNG2Q16589 344 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 ZNF805Q5CZA5 627 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 USP30Q70CQ3 517 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 PRELID2Q8N945 189 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 FAM71DQ8N9W8 422 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 PPP1R16AQ96I34 528 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 SPACA7Q96KW9 195 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 NAP1L3Q99457 506 aaPredicted RBP19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 VAT1Q99536 393 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 FERMT1Q9BQL6 677 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 AP1M1Q9BXS5 423 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 GLOD4Q9HC38 313 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 DYRK4Q9NR20 520 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 PCDHGC4Q9Y5F7 938 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 PCDHGA2Q9Y5H1 932 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 CEP192Q8TEP8 1941 aa19.18■□□□□ 0.66
CLPTM1-209ENST00000588855 SPAG17Q6Q759 2223 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 HRO43593 1189 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 LILRB5O75023 590 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 MMP2P08253 660 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 NFKB1P19838 968 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 BCKDHBP21953 392 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 SERPINA4P29622 427 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 BCL2L1Q07817 233 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 TRAF2Q12933 501 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 RALGPS1Q5JS13 557 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 AGBL4Q5VU57 503 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 PID1Q7Z2X4 250 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 KBTBD6Q86V97 674 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 CREG2Q8IUH2 290 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 GAB3Q8WWW8 586 aa19.17■□□□□ 0.66
CLPTM1-209ENST00000588855 NEUROG2Q9H2A3 272 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms