RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZFXP17010 805 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 CHKAP35790 457 aa8□□□□□ -1.13
VMP1-204ENST00000587259 COILP38432 576 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 TKTL1P51854 596 aa8□□□□□ -1.13
VMP1-204ENST00000587259 ZNF135P52742 658 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 TAS2R40P59535 323 aa8□□□□□ -1.13
VMP1-204ENST00000587259 COG7P83436 770 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SLC7A5Q01650 507 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SLC25A11Q02978 314 aaKnown RBP8□□□□□ -1.13
VMP1-204ENST00000587259 KLF1Q13351 362 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 CAMK2GQ13555 558 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 PPP1R7Q15435 360 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SHBQ15464 509 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SMAD1Q15797 465 aaKnown RBP8□□□□□ -1.13
VMP1-204ENST00000587259 C2CD6Q53TS8 623 aa8□□□□□ -1.13
VMP1-204ENST00000587259 CFAP58Q5T655 872 aa8□□□□□ -1.13
VMP1-204ENST00000587259 PMF1Q6P1K2 205 aa8□□□□□ -1.13
VMP1-204ENST00000587259 IL27RAQ6UWB1 636 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SPOCD1Q6ZMY3 1216 aa8□□□□□ -1.13
VMP1-204ENST00000587259 ADAT2Q7Z6V5 191 aaKnown RBP8□□□□□ -1.13
VMP1-204ENST00000587259 CROCCP2Q86T23 111 aa8□□□□□ -1.13
VMP1-204ENST00000587259 JAMLQ86YT9 394 aa8□□□□□ -1.13
VMP1-204ENST00000587259 SCML4Q8N228 414 aa8□□□□□ -1.13
VMP1-204ENST00000587259 PRELID2Q8N945 189 aa8□□□□□ -1.13
VMP1-204ENST00000587259 ATL2Q8NHH9 583 aa8□□□□□ -1.13
VMP1-204ENST00000587259 GANCQ8TET4 914 aa8□□□□□ -1.13
VMP1-204ENST00000587259 IRGQQ8WZA9 623 aa8□□□□□ -1.13
VMP1-204ENST00000587259 FMO2Q99518 471 aa8□□□□□ -1.13
VMP1-204ENST00000587259 CDC6Q99741 560 aa8□□□□□ -1.13
VMP1-204ENST00000587259 FOXP3Q9BZS1 431 aa8□□□□□ -1.13
VMP1-204ENST00000587259 TRIM7Q9C029 511 aa8□□□□□ -1.13
VMP1-204ENST00000587259 ZNF446Q9NWS9 450 aa8□□□□□ -1.13
VMP1-204ENST00000587259 RCOR3Q9P2K3 495 aaPredicted RBP8□□□□□ -1.13
VMP1-204ENST00000587259 FTSJ1Q9UET6 329 aa8□□□□□ -1.13
VMP1-204ENST00000587259 GGA2Q9UJY4 613 aa8□□□□□ -1.13
VMP1-204ENST00000587259 PLXNA2O75051 1894 aa8□□□□□ -1.13
VMP1-204ENST00000587259 hCG_1818297A0A087WSY0 165 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 A0A087WV48 116 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 A0A1W2PP55 124 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 GOLGA6BA6NDN3 693 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 YJEFN3A6XGL0 299 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 E7ENQ6 273 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 MID1O15344 667 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 TTI1O43156 1089 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 PAPSS1O43252 624 aaPredicted RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 OPA1O60313 960 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 TBL1XO60907 577 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 RARAP10276 462 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 PABPC1P11940 636 aaKnown RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 KRT10P13645 584 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 MIPP30301 263 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 SLC6A4P31645 630 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 GJC1P36383 396 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 CDKN2BP42772 138 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 CTSKP43235 329 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 GRK6P43250 576 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 ABCG1P45844 678 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 RGS7P49802 495 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 CCT8P50990 548 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 METAP1P53582 386 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 OGDHQ02218 1023 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 ADIGQ0VDE8 80 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 BNIP3Q12983 259 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 PTK6Q13882 451 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 SLMAPQ14BN4 828 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 TRIP4Q15650 581 aaPredicted RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 TAZQ16635 292 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 RAB41Q5JT25 222 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 MBLAC2Q68D91 279 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 DUPD1Q68J44 220 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 NCEH1Q6PIU2 408 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 BBS12Q6ZW61 710 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 SND1Q7KZF4 910 aaKnown RBP eCLIP7.99□□□□□ -1.13
VMP1-204ENST00000587259 BEND5Q7L4P6 421 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 PHLDB2Q86SQ0 1253 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 FAM217AQ8IXS0 508 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 CPXM2Q8N436 756 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 EID2Q8N6I1 236 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 KCTD6Q8NC69 237 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 JOSD2Q8TAC2 188 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 FAM71BQ8TC56 605 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 CLEC4CQ8WTT0 213 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 RXFP2Q8WXD0 754 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 IFT81Q8WYA0 676 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 IGSF8Q969P0 613 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 HAUS1Q96CS2 278 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 MYO19Q96H55 970 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 CCDC114Q96M63 670 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 ZNF670Q9BS34 389 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 MAK16Q9BXY0 300 aaKnown RBP7.99□□□□□ -1.13
VMP1-204ENST00000587259 DCLK3Q9C098 648 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.99□□□□□ -1.13
VMP1-204ENST00000587259 CLIC5Q9NZA1 410 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 WHRNQ9P202 907 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 ZNF510Q9Y2H8 683 aa7.99□□□□□ -1.13
VMP1-204ENST00000587259 PCDHGB2Q9Y5G2 931 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms