RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 D6RAR5 112 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 TOR1BO14657 336 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 PLD2O14939 933 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 AREL1O15033 823 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 NOBOXO60393 691 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 CD160O95971 181 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 F9P00740 461 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 ITGB2P05107 769 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 IGFALSP35858 605 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 YPEL5P62699 121 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 SGCGQ13326 291 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 PTK2BQ14289 1009 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 SLC25A52Q3SY17 297 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 PRRT3Q5FWE3 981 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 KLHL10Q6JEL2 608 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 LRRC31Q6UY01 552 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 MACC1Q6ZN28 852 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 ARHGEF26Q96DR7 871 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 CLPBQ9H078 707 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.36□□□□□ -0.11
CXXC1-208ENST00000587170 IPO11Q9UI26 975 aaKnown RBP14.36□□□□□ -0.11
CXXC1-208ENST00000587170 GGT7Q9UJ14 662 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 CTNND2Q9UQB3 1225 aa14.36□□□□□ -0.11
CXXC1-208ENST00000587170 USP9XQ93008 2570 aaPredicted RBP14.36□□□□□ -0.11
CXXC1-208ENST00000587170 SPTAN1Q13813 2472 aaKnown RBP14.36□□□□□ -0.11
CXXC1-208ENST00000587170 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
CXXC1-208ENST00000587170 C16orf96A6NNT2 1141 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 CCKBRP32239 447 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 CDH5P33151 784 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-208ENST00000587170 GABRB2P47870 512 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 SULT1E1P49888 294 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 GNA12Q03113 381 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 MORC3Q14149 939 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 LINC00303Q3SY05 128 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ZNF805Q5CZA5 627 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 PRICKLE2Q7Z3G6 844 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 B3GNT8Q7Z7M8 397 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ARL10Q8N8L6 244 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 HAPLN3Q96S86 360 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 TBCBQ99426 244 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ZYG11BQ9C0D3 744 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ZDHHC6Q9H6R6 413 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 TMPRSS4Q9NRS4 437 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
CXXC1-208ENST00000587170 IL17BQ9UHF5 180 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 PADI4Q9UM07 663 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 ITM2BQ9Y287 266 aa14.35□□□□□ -0.11
CXXC1-208ENST00000587170 FCF1Q9Y324 198 aaKnown RBP14.35□□□□□ -0.11
CXXC1-208ENST00000587170 YY2O15391 372 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ENDOD1O94919 500 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 GSRP00390 522 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ANXA6P08133 673 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 TSHRP16473 764 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ITGB6P18564 788 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 SLC9A1P19634 815 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 SLC5A2P31639 672 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 UGT1A5P35504 534 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 THOP1P52888 689 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
CXXC1-208ENST00000587170 APBA1Q02410 837 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 PTK2Q05397 1052 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 DEUP1Q05D60 604 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 PAK1Q13153 545 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ARHGAP44Q17R89 818 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 MANEALQ5VSG8 457 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ISM2Q6H9L7 571 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 LVRNQ6Q4G3 990 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 FSTL5Q8N475 847 aaPredicted RBP14.34□□□□□ -0.11
CXXC1-208ENST00000587170 KYQ8NBH2 561 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 ARHGEF2Q92974 986 aaKnown RBP14.34□□□□□ -0.11
CXXC1-208ENST00000587170 SGF29Q96ES7 293 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 CRACR2AQ9BSW2 395 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 OSBPL1AQ9BXW6 950 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 HECAQ9UBI9 543 aaPredicted RBP14.34□□□□□ -0.11
CXXC1-208ENST00000587170 RABGEF1Q9UJ41 708 aa14.34□□□□□ -0.11
CXXC1-208ENST00000587170 TMX2-CTNND1H3BSU7 103 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 LIPCP11150 499 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 KRT10P13645 584 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 CLCN1P35523 988 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 FLT3P36888 993 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 ETFBP38117 255 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 USP8P40818 1118 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 GEMIN4P57678 1058 aaKnown RBP14.33□□□□□ -0.12
CXXC1-208ENST00000587170 NRG1Q02297 640 aaPredicted RBP14.33□□□□□ -0.12
CXXC1-208ENST00000587170 SRSF1Q07955 248 aaKnown RBP eCLIP14.33□□□□□ -0.12
CXXC1-208ENST00000587170 NFATC3Q12968 1075 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 TRNP1Q6NT89 227 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 ESRP1Q6NXG1 681 aaKnown RBP14.33□□□□□ -0.12
CXXC1-208ENST00000587170 RAB11FIP2Q7L804 512 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 ARCQ7LC44 396 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 SDR16C5Q8N3Y7 309 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 TP53I13Q8NBR0 393 aaPredicted RBP14.33□□□□□ -0.12
CXXC1-208ENST00000587170 OR2AP1Q8NGE2 309 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 SEMA3CQ99985 751 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 SPON2Q9BUD6 331 aa14.33□□□□□ -0.12
CXXC1-208ENST00000587170 TM6SF2Q9BZW4 377 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms