RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CRATP43155 626 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
RNF43-208ENST00000584437 MMP14P50281 582 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 GALK1P51570 392 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
RNF43-208ENST00000584437 CDH8P55286 799 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
RNF43-208ENST00000584437 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ARMC8Q8IUR7 673 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 UBE2E3Q969T4 207 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ZNF222Q9UK12 451 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 MATN2O00339 956 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 SGTAO43765 313 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 FGFR1P11362 822 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 EPHA3P29320 983 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 MARCKSL1P49006 195 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 NEK5Q6P3R8 708 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 OR52L1Q8NGH7 329 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 PTGFRNQ9P2B2 879 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 CPS1P31327 1500 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ASTN1O14525 1302 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNF43-208ENST00000584437 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
RNF43-208ENST00000584437 CYP7B1O75881 506 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 RAB27AP51159 221 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 NELL1Q92832 810 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
RNF43-208ENST00000584437 MTRF1O75570 445 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 CATP04040 527 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 ERBB2P04626 1255 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 IRF8Q02556 426 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 PUDPQ08623 228 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 MFSD4BQ5TF39 518 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 RNF220Q5VTB9 566 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 IRF2BP2Q7Z5L9 587 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SNX15Q9NRS6 342 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 ENTPD4Q9Y227 616 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 ULK1O75385 1050 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 IGSF6O95976 241 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SLC7A2P52569 658 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 RAB15P59190 212 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 GTF2BQ00403 316 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 METTL21CQ5VZV1 264 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 C10orf107Q8IVU9 208 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 ATL1Q8WXF7 558 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 HSFY1Q96LI6 401 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 NLNQ9BYT8 704 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SETD4Q9NVD3 440 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SAMHD1Q9Y3Z3 626 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 EML1O00423 815 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 AZIN1O14977 448 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 UGT2B11O75310 529 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 ATP6V0D1P61421 351 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 STOML2Q9UJZ1 356 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 FAM50BQ9Y247 325 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 RTN3O95197 1032 aaPredicted RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 NTSP30990 170 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 ABCG1P45844 678 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 KLF10Q13118 480 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 CCL15Q16663 113 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 TYSND1Q2T9J0 566 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 ARMC12Q5T9G4 340 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 LPCAT4Q643R3 524 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 FAM20CQ8IXL6 584 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 CD101Q93033 1021 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
RNF43-208ENST00000584437 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 CCDC59Q9P031 241 aaKnown RBP13.15□□□□□ -0.3
RNF43-208ENST00000584437 A0A1W2PPM1 405 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 IRGMA1A4Y4 181 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 NR2F6P10588 404 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 CYP2A6P11509 494 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms