RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 C9orf72Q96LT7 481 aa11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 WDR12Q9GZL7 423 aaKnown RBP11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 HRH3Q9Y5N1 445 aa11.24□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CIB4A0PJX0 185 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 AKAP10O43572 662 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 OAZ2O95190 189 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CLCNKBP51801 687 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TIMM10P62072 90 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 IFITM3Q01628 133 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PDK4Q16654 411 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 DNAJB8Q8NHS0 232 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PCNPQ8WW12 178 aaKnown RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TMEM80Q96HE8 168 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GON7Q9BXV9 100 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ELOVL6Q9H5J4 265 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 KCNH7Q9NS40 1196 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TAGLN3Q9UI15 199 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SERPINB13Q9UIV8 391 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 DERAQ9Y315 318 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 C17orf113A0A1B0GUU1 675 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 WWP2O00308 870 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TBX1O43435 398 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 KRT18P05783 430 aaKnown RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 LTA4HP09960 611 aaKnown RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CCNE1P24864 410 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PIK3R1P27986 724 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SLC1A5Q15758 541 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SMG7Q92540 1137 aaKnown RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 DCLK3Q9C098 648 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CYP4F12Q9HCS2 524 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GOLGB1Q14789 3259 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ESYT2A0FGR8 921 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 RD3LP0DJH9 198 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 MSH3P20585 1137 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 OSBPP22059 807 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SLC18A2Q05940 514 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CCNIQ14094 377 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 NTRK3Q16288 839 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TTC38Q5R3I4 469 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 HES5Q5TA89 166 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GTF2IRD2BQ6EKJ0 949 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GTF2IRD2Q86UP8 949 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SNX31Q8N9S9 440 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 C3orf58Q8NDZ4 430 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 FNIP1Q8TF40 1166 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 NAT9Q9BTE0 207 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 XPNPEP1Q9NQW7 623 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PCDHGA9Q9Y5G4 932 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 PLATP00750 562 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CD63P08962 238 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GAP43P17677 238 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 F8A1P23610 371 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 HTR7P34969 479 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GRIA1P42261 906 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TPMTP51580 245 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 RNF4P78317 190 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 COTL1Q14019 142 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 RAB39AQ14964 217 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 IQCCQ4KMZ1 466 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 TYW3Q6IPR3 259 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SYCE2Q6PIF2 218 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 KIAA0408Q6ZU52 694 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SLC37A3Q8NCC5 494 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 GPR156Q8NFN8 814 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 ZNF416Q9BWM5 594 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 SORBS1Q9BX66 1292 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 OSBPL11Q9BXB4 747 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 UTRNP46939 3433 aa11.22□□□□□ -0.61
CCDC144NL-AS1-218ENST00000583962 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms