RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RPL21P46778 160 aaKnown RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 AP1S1P61966 158 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 SIGLEC14Q08ET2 396 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CAMK2GQ13555 558 aaPredicted RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 LRRC32Q14392 662 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 GAS6Q14393 721 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 TRADDQ15628 312 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 GLE1Q53GS7 698 aaKnown RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 RALGPS1Q5JS13 557 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 DUPD1Q68J44 220 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 KIAA1211LQ6NV74 962 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 KDELC1Q6UW63 502 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 TRIM67Q6ZTA4 783 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 RYBPQ8N488 228 aaPredicted RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 PJA1Q8NG27 643 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CLDN23Q96B33 292 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CPEB1Q9BZB8 566 aaKnown RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 OSBPL6Q9BZF3 934 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 TRIM31Q9BZY9 425 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CD248Q9HCU0 757 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 HAUS2Q9NVX0 235 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 DMGDHQ9UI17 866 aaKnown RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TCRBV7S3A2A0A539 114 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 EFCAB8A8MWE9 144 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 CHURC1-FNTBB4DL54 471 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TP73O15350 636 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 PMPCBO75439 489 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 HEXIM1O94992 359 aaKnown RBP9.64□□□□□ -0.87
RFFL-210ENST00000582308 CTSLP07711 333 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SERPINF2P08697 491 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 RHOXF2BP0C7M4 288 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 HOXB2P14652 356 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 COL9A1P20849 921 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 MAGEA6P43360 314 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
RFFL-210ENST00000582308 TERF1P54274 439 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 WNT3AP56704 352 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 OLIG2Q13516 323 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SEMA5AQ13591 1074 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 HSF5Q4G112 596 aaPredicted RBP9.64□□□□□ -0.87
RFFL-210ENST00000582308 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 EOGTQ5NDL2 527 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TEX35Q5T0J7 233 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 ANKRD22Q5VYY1 191 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 KCTD11Q693B1 232 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SDE2Q6IQ49 451 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TRMT11Q7Z4G4 463 aaKnown RBP9.64□□□□□ -0.87
RFFL-210ENST00000582308 CAMK1DQ8IU85 385 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 CCHCR1Q8TD31 782 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 OR8D1Q8WZ84 308 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 CPT1BQ92523 772 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 LRRC45Q96CN5 670 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 HEPHQ9BQS7 1158 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 RHOXF2Q9BQY4 288 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 ZDHHC6Q9H6R6 413 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 C2orf42Q9NWW7 574 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 FAM153AQ9UHL3 310 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SARDHQ9UL12 918 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 MMP17Q9ULZ9 603 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SNX24Q9Y343 169 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 SIT1Q9Y3P8 196 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
RFFL-210ENST00000582308 PCDHGC4Q9Y5F7 938 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 RAI2Q9Y5P3 530 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 EML5Q05BV3 1969 aa9.64□□□□□ -0.87
RFFL-210ENST00000582308 TRPM6Q9BX84 2022 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 M0R296 226 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 TRAFD1O14545 582 aaPredicted RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 DNALI1O14645 258 aaPredicted RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 ALOX15BO15296 676 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 HTRA2O43464 458 aaPredicted RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 PI15O43692 258 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SYNCRIPO60506 623 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 LEFTY1O75610 366 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 ANXA9O76027 345 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SEC31AO94979 1220 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 PIGNO95427 931 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 PRLP01236 227 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 UGT2B4P06133 528 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 DCNP07585 359 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 APRTP07741 180 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 ALADP13716 330 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 ADRA1AP35348 466 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 MAPK8P45983 427 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 DRG2P55039 364 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 GEMP55040 296 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 GUCY2DQ02846 1103 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 RAD51Q06609 339 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 TRAF2Q12933 501 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 MPP3Q13368 585 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SPARCL1Q14515 664 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms