RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CDH18Q13634 790 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 RFTN1Q14699 578 aaPredicted RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 ANKRD20A4Q4UJ75 823 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 CERCAMQ5T4B2 595 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 ARMC3Q5W041 872 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 RNF219Q5W0B1 726 aaPredicted RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 KCTD11Q693B1 232 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 PDPK2PQ6A1A2 396 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 TXNDC8Q6A555 127 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 ZNF534Q76KX8 674 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 PRPF39Q86UA1 669 aaKnown RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 TRIM42Q8IWZ5 723 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 SUGP1Q8IWZ8 645 aaKnown RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 CACNA2D3Q8IZS8 1091 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 SLC25A41Q8N5S1 370 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 SPATA22Q8NHS9 363 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 ZNF473Q8WTR7 871 aaKnown RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 DDI1Q8WTU0 396 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 SREK1Q8WXA9 508 aaKnown RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 CERS2Q96G23 380 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 MAGEB18Q96M61 343 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 CYP2S1Q96SQ9 504 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 DHRS4Q9BTZ2 278 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 MLPHQ9BV36 600 aaPredicted RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 RNF38Q9H0F5 515 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 CPQQ9Y646 472 aa9.41□□□□□ -0.9
SS18-220ENST00000582092 MYO18AQ92614 2054 aaKnown RBP9.41□□□□□ -0.9
SS18-220ENST00000582092 HEATR9A2RTY3 570 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 FOXO6A8MYZ6 492 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 TCP11X1B4DZS4 312 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CBX4O00257 560 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 ZNF197O14709 1029 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PIAS1O75925 651 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 ALDH1A2O94788 518 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PAPLNO95428 1278 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 MT-CYBP00156 380 aaPredicted RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 SERPINF2P08697 491 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 ERVK-10P10266 1014 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PYGBP11216 843 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 FSHRP23945 695 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 SLC6A4P31645 630 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 AVPR1AP37288 418 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 GP5P40197 560 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 HADHAP40939 763 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 SERPINH1P50454 418 aaKnown RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 MAXP61244 160 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 CYP4F8P98187 520 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 SLC10A7Q0GE19 358 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 POU6F1Q14863 301 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 UGP2Q16851 508 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 C5orf22Q49AR2 442 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 MPPE1Q53F39 396 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 MROH9Q5TGP6 573 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PKN3Q6P5Z2 889 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 LVRNQ6Q4G3 990 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CES3Q6UWW8 571 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 ZNF783Q6ZMS7 281 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 MARK2Q7KZI7 788 aaKnown RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 GET4Q7L5D6 327 aaPredicted RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 NLRP9Q7RTR0 991 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 BMP8AQ7Z5Y6 402 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CCDC91Q7Z6B0 441 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 STRA8Q7Z7C7 330 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 KCNMB4Q86W47 210 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CCDC63Q8NA47 563 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 LEMD2Q8NC56 503 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CCDC197Q8NCU1 140 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CALML6Q8TD86 181 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CKAP2Q8WWK9 683 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 GRAMD1AQ96CP6 724 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 OXNAD1Q96HP4 312 aaPredicted RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 APOPT1Q96IL0 206 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CABS1Q96KC9 395 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 PRRX2Q99811 253 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 SEMA3CQ99985 751 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 WDR83Q9BRX9 315 aaKnown RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 SLC13A1Q9BZW2 595 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 ZNF334Q9HCZ1 680 aaPredicted RBP9.4□□□□□ -0.9
SS18-220ENST00000582092 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 MOCS1Q9NZB8 636 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 CFAP97Q9P2B7 532 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 NEU3Q9UQ49 428 aa9.4□□□□□ -0.9
SS18-220ENST00000582092 TECTAO75443 2155 aa9.4□□□□□ -0.91
SS18-220ENST00000582092 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 VCANP13611 3396 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 A0A1W2PRU2 124 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 FAM86C2PA6NEL3 165 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 CXorf49A8MYA2 514 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 M0R296 226 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms