RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ZNF234Q14588 700 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 OASLQ15646 514 aaKnown RBP12.33□□□□□ -0.44
CCDC84-209ENST00000580556 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 PLPP6Q8IY26 295 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 TEX26Q8N6G2 289 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 PRELID2Q8N945 189 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 NETO2Q8NC67 525 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 SORCS1Q8WY21 1168 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 VAT1Q99536 393 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 GABRG3Q99928 467 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 FERMT1Q9BQL6 677 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 TMEM245Q9H330 911 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 SEPT3Q9UH03 358 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
CCDC84-209ENST00000580556 KRIT1O00522 736 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 TMCC1O94876 653 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 APBB3O95704 486 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 MT-CO1P00395 513 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ITGAVP06756 1048 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 CCNB1P14635 433 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 VAV1P15498 845 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 NTSR1P30989 418 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 MAPK8P45983 427 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 STK19P49842 368 aaPredicted RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 AP1B1Q10567 949 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 BYSLQ13895 437 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 HNRNPA1L2Q32P51 320 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 MARC1Q5VT66 337 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 C22orf39Q6P5X5 142 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 SERPINA13PQ6UXR4 307 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 LINGO4Q6UY18 593 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF572Q7Z3I7 529 aaPredicted RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ZC3H18Q86VM9 953 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 BBS5Q8N3I7 341 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 PCDH20Q8N6Y1 951 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 IL17RCQ8NAC3 791 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 PIGKQ92643 395 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 RTP4Q96DX8 246 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 CAPZA3Q96KX2 299 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 RPL10LQ96L21 214 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 PSKH2Q96QS6 385 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 DNPEPQ9ULA0 475 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
CCDC84-209ENST00000580556 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
CCDC84-209ENST00000580556 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 EDDM13A0A1B0GTR0 161 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 TARSL2A2RTX5 802 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 H7C0C1 242 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CCDC188H7C350 402 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SMAD6O43541 496 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 PHF2O75151 1096 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 GSRP00390 522 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 C7P10643 843 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 STIP1P31948 543 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CHRNA3P32297 505 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 IL12RB1P42701 662 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 MMP13P45452 471 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 ATP5OP48047 213 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 FNTAP49354 379 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 DHPSP49366 369 aaPredicted RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 FAM193AP78312 1265 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 NSUN2Q08J23 767 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SLC10A7Q0GE19 358 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF235Q14590 738 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 DLG2Q15700 870 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 COL28A1Q2UY09 1125 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 FNDC3BQ53EP0 1204 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 RALGPS1Q5JS13 557 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SDE2Q6IQ49 451 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SYT13Q7L8C5 426 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 PDZD3Q86UT5 571 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 PROSER1Q86XN7 944 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CHPFQ8IZ52 775 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CHCHD4Q8N4Q1 142 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 C1orf54Q8WWF1 131 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 ATG4AQ8WYN0 398 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF419Q96HQ0 510 aaPredicted RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CCDC114Q96M63 670 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms