RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 UGT2B4P06133 528 aa15.05■□□□□ -0
SS18-212ENST00000579061 TCF4P15884 667 aa15.05■□□□□ -0
SS18-212ENST00000579061 CSNK1DP48730 415 aa15.05■□□□□ -0
SS18-212ENST00000579061 NXPH1P58417 271 aa15.05■□□□□ -0
SS18-212ENST00000579061 RPS21P63220 83 aaKnown RBP15.05■□□□□ -0
SS18-212ENST00000579061 TBX2Q13207 712 aaPredicted RBP15.05■□□□□ -0
SS18-212ENST00000579061 RFTN1Q14699 578 aaPredicted RBP15.05■□□□□ -0
SS18-212ENST00000579061 SMTNL2Q2TAL5 461 aa15.05■□□□□ -0
SS18-212ENST00000579061 ZNF284Q2VY69 593 aa15.05■□□□□ -0
SS18-212ENST00000579061 GDPD4Q6W3E5 623 aa15.05■□□□□ -0
SS18-212ENST00000579061 GLRX5Q86SX6 157 aa15.05■□□□□ -0
SS18-212ENST00000579061 OXR1Q8N573 874 aa15.05■□□□□ -0
SS18-212ENST00000579061 NPWQ8N729 165 aa15.05■□□□□ -0
SS18-212ENST00000579061 OR6K2Q8NGY2 324 aa15.05■□□□□ -0
SS18-212ENST00000579061 FAM71BQ8TC56 605 aa15.05■□□□□ -0
SS18-212ENST00000579061 HCAR2Q8TDS4 363 aa15.05■□□□□ -0
SS18-212ENST00000579061 HSPH1Q92598 858 aa15.05■□□□□ -0
SS18-212ENST00000579061 CCDC42Q96M95 316 aa15.05■□□□□ -0
SS18-212ENST00000579061 KLHL32Q96NJ5 620 aa15.05■□□□□ -0
SS18-212ENST00000579061 ELF4Q99607 663 aaPredicted RBP15.05■□□□□ -0
SS18-212ENST00000579061 PCDH18Q9HCL0 1135 aa15.05■□□□□ -0
SS18-212ENST00000579061 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.05■□□□□ -0
SS18-212ENST00000579061 RCOR3Q9P2K3 495 aaPredicted RBP15.05■□□□□ -0
SS18-212ENST00000579061 LHX3Q9UBR4 397 aa15.05■□□□□ -0
SS18-212ENST00000579061 ANGPTL2Q9UKU9 493 aa15.05■□□□□ -0
SS18-212ENST00000579061 PCOLCE2Q9UKZ9 415 aa15.05■□□□□ -0
SS18-212ENST00000579061 ZFR2Q9UPR6 939 aaKnown RBP15.05■□□□□ -0
SS18-212ENST00000579061 AKR1B15C9JRZ8 316 aaPredicted RBP15.04■□□□□ -0
SS18-212ENST00000579061 SLC31A1O15431 190 aa15.04■□□□□ -0
SS18-212ENST00000579061 PROSCO94903 275 aa15.04■□□□□ -0
SS18-212ENST00000579061 TMEM253P0C7T8 217 aa15.04■□□□□ -0
SS18-212ENST00000579061 HNRNPA2B1P22626 353 aaKnown RBP15.04■□□□□ -0
SS18-212ENST00000579061 AMPD1P23109 780 aa15.04■□□□□ -0
SS18-212ENST00000579061 AKT2P31751 481 aa15.04■□□□□ -0
SS18-212ENST00000579061 GKP32189 559 aa15.04■□□□□ -0
SS18-212ENST00000579061 RXRGP48443 463 aa15.04■□□□□ -0
SS18-212ENST00000579061 SUOXP51687 545 aa15.04■□□□□ -0
SS18-212ENST00000579061 ADKP55263 362 aaKnown RBP15.04■□□□□ -0
SS18-212ENST00000579061 SIM1P81133 766 aaPredicted RBP15.04■□□□□ -0
SS18-212ENST00000579061 IL10RBQ08334 325 aa15.04■□□□□ -0
SS18-212ENST00000579061 TRIP6Q15654 476 aaKnown RBP15.04■□□□□ -0
SS18-212ENST00000579061 INAVAQ3KP66 663 aa15.04■□□□□ -0
SS18-212ENST00000579061 TMCO4Q5TGY1 634 aa15.04■□□□□ -0
SS18-212ENST00000579061 TXNRD3NBQ6F5E7 133 aa15.04■□□□□ -0
SS18-212ENST00000579061 TMCO3Q6UWJ1 677 aa15.04■□□□□ -0
SS18-212ENST00000579061 BAHD1Q8TBE0 780 aaPredicted RBP15.04■□□□□ -0
SS18-212ENST00000579061 ASB12Q8WXK4 309 aa15.04■□□□□ -0
SS18-212ENST00000579061 TSC1Q92574 1164 aa15.04■□□□□ -0
SS18-212ENST00000579061 ZNF599Q96NL3 588 aa15.04■□□□□ -0
SS18-212ENST00000579061 CSPG4P5Q96PW8 444 aa15.04■□□□□ -0
SS18-212ENST00000579061 CHP1Q99653 195 aa15.04■□□□□ -0
SS18-212ENST00000579061 CDC6Q99741 560 aa15.04■□□□□ -0
SS18-212ENST00000579061 TRIM5Q9C035 493 aa15.04■□□□□ -0
SS18-212ENST00000579061 NHEJ1Q9H9Q4 299 aaPredicted RBP15.04■□□□□ -0
SS18-212ENST00000579061 SP110Q9HB58 689 aa15.04■□□□□ -0
SS18-212ENST00000579061 HS3ST3A1Q9Y663 406 aa15.04■□□□□ -0
SS18-212ENST00000579061 SHROOM3Q8TF72 1996 aa15.04■□□□□ -0
SS18-212ENST00000579061 DFFAO00273 331 aa15.03■□□□□ -0
SS18-212ENST00000579061 KCNK3O14649 394 aa15.03■□□□□ -0
SS18-212ENST00000579061 AREL1O15033 823 aa15.03■□□□□ -0
SS18-212ENST00000579061 PALMO75781 387 aa15.03■□□□□ -0
SS18-212ENST00000579061 TRIM16O95361 564 aa15.03■□□□□ -0
SS18-212ENST00000579061 MAN1A1P33908 653 aa15.03■□□□□ -0
SS18-212ENST00000579061 SERPINB6P35237 376 aa15.03■□□□□ -0
SS18-212ENST00000579061 ABL2P42684 1182 aa15.03■□□□□ -0
SS18-212ENST00000579061 GRK6P43250 576 aa15.03■□□□□ -0
SS18-212ENST00000579061 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
SS18-212ENST00000579061 FAM193AP78312 1265 aa15.03■□□□□ -0
SS18-212ENST00000579061 NSUN2Q08J23 767 aaKnown RBP eCLIP15.03■□□□□ -0
SS18-212ENST00000579061 SEL1L3Q68CR1 1132 aa15.03■□□□□ -0
SS18-212ENST00000579061 RHBDD1Q8TEB9 315 aa15.03■□□□□ -0
SS18-212ENST00000579061 SETD7Q8WTS6 366 aaKnown RBP15.03■□□□□ -0
SS18-212ENST00000579061 KLHDC7BQ96G42 594 aa15.03■□□□□ -0
SS18-212ENST00000579061 ZNF641Q96N77 438 aaPredicted RBP15.03■□□□□ -0
SS18-212ENST00000579061 CAMK1GQ96NX5 476 aa15.03■□□□□ -0
SS18-212ENST00000579061 TUBGCP5Q96RT8 1024 aa15.03■□□□□ -0
SS18-212ENST00000579061 PACSIN1Q9BY11 444 aa15.03■□□□□ -0
SS18-212ENST00000579061 SLC17A9Q9BYT1 436 aa15.03■□□□□ -0
SS18-212ENST00000579061 IPO11Q9UI26 975 aaKnown RBP15.03■□□□□ -0
SS18-212ENST00000579061 COL5A1P20908 1838 aaPredicted RBP15.03■□□□□ -0
SS18-212ENST00000579061 ARID1BQ8NFD5 2236 aaPredicted RBP15.02■□□□□ -0
SS18-212ENST00000579061 ACACBO00763 2458 aa15.02■□□□□ -0
SS18-212ENST00000579061 SPAARA0A1B0GVQ0 90 aa15.02■□□□□ -0
SS18-212ENST00000579061 TSPAN11A1L157 253 aa15.02■□□□□ -0
SS18-212ENST00000579061 KRT7P08729 469 aa15.02■□□□□ -0
SS18-212ENST00000579061 PRLRP16471 622 aa15.02■□□□□ -0
SS18-212ENST00000579061 RENBPP51606 427 aa15.02■□□□□ -0
SS18-212ENST00000579061 ARSEP51690 589 aa15.02■□□□□ -0
SS18-212ENST00000579061 CDH6P55285 790 aa15.02■□□□□ -0
SS18-212ENST00000579061 KRT81Q14533 505 aa15.02■□□□□ -0
SS18-212ENST00000579061 PDK2Q15119 407 aa15.02■□□□□ -0
SS18-212ENST00000579061 ABI3BPQ7Z7G0 1075 aa15.02■□□□□ -0
SS18-212ENST00000579061 TTC7BQ86TV6 843 aa15.02■□□□□ -0
SS18-212ENST00000579061 SPATS2Q86XZ4 545 aaKnown RBP15.02■□□□□ -0
SS18-212ENST00000579061 DCP2Q8IU60 420 aaKnown RBP15.02■□□□□ -0
SS18-212ENST00000579061 LRRC49Q8IUZ0 686 aa15.02■□□□□ -0
SS18-212ENST00000579061 DENND6BQ8NEG7 585 aa15.02■□□□□ -0
SS18-212ENST00000579061 KLK6Q92876 244 aa15.02■□□□□ -0
SS18-212ENST00000579061 LENG8Q96PV6 779 aaPredicted RBP15.02■□□□□ -0
SS18-212ENST00000579061 C1QTNF2Q9BXJ5 285 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms