RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 GRASPQ7Z6J2 395 aaPredicted RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 TMA16Q96EY4 203 aaKnown RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 VPS11Q9H270 941 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 ATP13A1Q9HD20 1204 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 PLK2Q9NYY3 685 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 RPL26L1Q9UNX3 145 aaKnown RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 TRANK1O15050 2925 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 CBX4O00257 560 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 LEFTY2O00292 366 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 TRAFD1O14545 582 aaPredicted RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 C1RP00736 705 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 GEMP55040 296 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 CXorf57Q6NSI4 855 aaKnown RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 TPGS1Q6ZTW0 290 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 CHST9Q7L1S5 443 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 DCAKDQ8WVC6 231 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 SPOCK2Q92563 424 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 BATF3Q9NR55 127 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 MUSKO15146 869 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 UGT1A9O60656 530 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 MOSPD3O75425 235 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 C1QAP02745 245 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 TROVE2P10155 538 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMG8-203ENST00000578922 PGAM1P18669 254 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 AVPR1AP37288 418 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 OXCT1P55809 520 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 ZNF235Q14590 738 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 TMCO4Q5TGY1 634 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 TEX26Q8N6G2 289 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 DDI1Q8WTU0 396 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 MZB1Q8WU39 189 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 PBX4Q9BYU1 374 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 SLC25A51Q9H1U9 297 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 NKX2-4Q9H2Z4 354 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 UGT1A7Q9HAW7 530 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 UGT1A10Q9HAW8 530 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 UGT1A8Q9HAW9 530 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 PDFQ9HBH1 243 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 SAR1AQ9NR31 198 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 SLC17A6Q9P2U8 582 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 IKBKGQ9Y6K9 419 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 RPS6KL1Q9Y6S9 549 aa20.5■□□□□ 0.87
SMG8-203ENST00000578922 CCDC195A0A1B0GUA6 201 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 CHRNA4P43681 627 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 CDH17Q12864 832 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 CRYMQ14894 314 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 OTOAQ7RTW8 1153 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 C12orf76Q8N812 135 aaPredicted RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 WFDC5Q8TCV5 224 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 SH3RF2Q8TEC5 729 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 GDPD5Q8WTR4 605 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 ING5Q8WYH8 240 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 MRGPRX2Q96LB1 330 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 ILVBLA1L0T0 632 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 PSMD3O43242 534 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 LATS1O95835 1130 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 INHBAP08476 426 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 PRKCHP24723 683 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 MZF1P28698 734 aaPredicted RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 IHHQ14623 411 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 LINC00523Q86TU6 105 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 SETD3Q86TU7 594 aaPredicted RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 SLC25A41Q8N5S1 370 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 BANPQ8N9N5 519 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 TDRD5Q8NAT2 981 aaKnown RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 HJURPQ8NCD3 748 aaPredicted RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 FATE1Q969F0 183 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 UTP4Q969X6 686 aaKnown RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 IMP4Q96G21 291 aaKnown RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 ABHD8Q96I13 439 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 FCRL3Q96P31 734 aaPredicted RBP20.49■□□□□ 0.87
SMG8-203ENST00000578922 CHRAC1Q9NRG0 131 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 TBC1D30Q9Y2I9 924 aa20.49■□□□□ 0.87
SMG8-203ENST00000578922 TYW5A2RUC4 315 aaKnown RBP20.48■□□□□ 0.87
SMG8-203ENST00000578922 A8MUI8 341 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 XYLBO75191 536 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 WNT3AP56704 352 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 CDH18Q13634 790 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 TTC39BQ5VTQ0 682 aaPredicted RBP20.48■□□□□ 0.87
SMG8-203ENST00000578922 LINGO4Q6UY18 593 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 HTR3DQ70Z44 454 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 RNF135Q8IUD6 432 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 CMTM8Q8IZV2 173 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 RIN3Q8TB24 985 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 SLC44A1Q8WWI5 657 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 ZNF669Q96BR6 464 aaPredicted RBP20.48■□□□□ 0.87
SMG8-203ENST00000578922 TUBB6Q9BUF5 446 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 HGSO14964 777 aaPredicted RBP20.48■□□□□ 0.87
SMG8-203ENST00000578922 KDELR3O43731 214 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 SNAP91O60641 907 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 POLBP06746 335 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 MMP2P08253 660 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 GSTA2P09210 222 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 CLNS1AP54105 237 aaKnown RBP20.48■□□□□ 0.87
SMG8-203ENST00000578922 EPHA5P54756 1037 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 POU6F1Q14863 301 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 STEAP4Q687X5 459 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 LRRC6Q86X45 466 aa20.48■□□□□ 0.87
SMG8-203ENST00000578922 KLHDC8BQ8IXV7 354 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms