RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 UBE2TQ9NPD8 197 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 TM7SF3Q9NS93 570 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 ACTR10Q9NZ32 417 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SERGEFQ9UGK8 458 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SLCO3A1Q9UIG8 710 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 AJAP1Q9UKB5 411 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 ST14Q9Y5Y6 855 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CKAP5Q14008 2032 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SYNJ2BP-COX16A0A087WUM0 186 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 FAM221BA6H8Z2 402 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 BECN2A8MW95 431 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 E5RJQ4 531 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 H0Y8X5 98 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 PLK4O00444 970 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 WNT9AO14904 365 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 MID1O15344 667 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 P4HA2O15460 535 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 PAPSS1O43252 624 aaPredicted RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 THAP12O43422 761 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 FBXO21O94952 628 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 AFPP02771 609 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 CAPNS1P04632 268 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 IGHV4-34P06331 123 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ATP5BP06576 529 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 VAV1P15498 845 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 TACR2P21452 398 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 USP8P40818 1118 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 RPL34P49207 117 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 STK19P49842 368 aaPredicted RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 IRAK1P51617 712 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 METAP1P53582 386 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ZNF445P59923 1031 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 NUCB2P80303 420 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 GCNT1Q02742 428 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 SCAPQ12770 1279 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 STILQ15468 1287 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ARHGAP44Q17R89 818 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 CCDC157Q569K6 752 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 MS4A13Q5J8X5 152 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 PITRM1Q5JRX3 1037 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 MPP7Q5T2T1 576 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 C9orf64Q5T6V5 341 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ZNF776Q68DI1 518 aaPredicted RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 C19orf48Q6RUI8 117 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 TMC3Q7Z5M5 1100 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 CREBRFQ8IUR6 639 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 PASD1Q8IV76 773 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 MMAAQ8IVH4 418 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 WDTC1Q8N5D0 677 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 FIBINQ8TAL6 211 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ZNF606Q8WXB4 792 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ADAMTS14Q8WXS8 1223 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 GOLGA1Q92805 767 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 AZIN2Q96A70 460 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 TTC17Q96AE7 1141 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 RPL10LQ96L21 214 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 ZDHHC5Q9C0B5 715 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 BTBD1Q9H0C5 482 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 RSPH9Q9H1X1 276 aaPredicted RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 NEUROG2Q9H2A3 272 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 PABPC3Q9H361 631 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 FBXL12Q9NXK8 326 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 COX16Q9P0S2 106 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 SUN2Q9UH99 717 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 HOOK1Q9UJC3 728 aaKnown RBP6.42□□□□□ -1.38
NUP88-212ENST00000576708 CNTN6Q9UQ52 1028 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ERVW-1Q9UQF0 538 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 ANKRD6Q9Y2G4 727 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.42□□□□□ -1.38
NUP88-212ENST00000576708 CEP295Q9C0D2 2601 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
NUP88-212ENST00000576708 NUMA1Q14980 2115 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 FAM149AA5PLN7 773 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 B2RBV5 119 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 H0Y626 953 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CBX4O00257 560 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CAPN9O14815 690 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 IRAK2O43187 625 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 GRAP2O75791 330 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 RNASEH2AO75792 299 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 LUC7L3O95232 432 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 TRIM16O95361 564 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 CER1O95813 267 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 TRUB2O95900 331 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 IGLV3-25P01717 112 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 WNT1P04628 370 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PNMA6AP0CW24 399 aaPredicted RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 CD27P26842 260 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 SLC8A1P32418 973 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 RDXP35241 583 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 CTSKP43235 329 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 PSMD8P48556 350 aa6.41□□□□□ -1.38
NUP88-212ENST00000576708 AFF3P51826 1226 aaKnown RBP6.41□□□□□ -1.38
NUP88-212ENST00000576708 GALCP54803 685 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms