RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SAMD4BQ5PRF9 694 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 STYK1Q6J9G0 422 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 RPS27LQ71UM5 84 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 PELI3Q8N2H9 469 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 FSTL5Q8N475 847 aaPredicted RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 P2RY11Q96G91 374 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CCDC138Q96M89 665 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 GLT1D1Q96MS3 346 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CSF3RQ99062 836 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 KLHL25Q9H0H3 589 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 TPK1Q9H3S4 243 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 SIAEQ9HAT2 523 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 ARMC1Q9NVT9 282 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 TSPAN16Q9UKR8 245 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 TRIP11Q15643 1979 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 SCN9AQ15858 1988 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 KLRG2A4D1S0 409 aaPredicted RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 MSCO60682 206 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CABYRO75952 493 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 SRP72O76094 671 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 DDHD2O94830 711 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 NR2C2P49116 596 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 IGBP1P78318 339 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 GHRHRQ02643 423 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 GRM1Q13255 1194 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 PRPSAP1Q14558 356 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 INTS11Q5TA45 600 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 PMF1Q6P1K2 205 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CMTR2Q8IYT2 770 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 OR13F1Q8NGS4 319 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 GPRASP2Q96D09 838 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 RPL10LQ96L21 214 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 C1QTNF1Q9BXJ1 281 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 TMEM134Q9H6X4 195 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 SLC38A10Q9HBR0 1119 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 XPR1Q9UBH6 696 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CTDP1Q9Y5B0 961 aaPredicted RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 PCNTO95613 3336 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 ZCWPW2A0A1B0GU75 182 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 IQCA1LA6NCM1 817 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 ITGB3P05106 788 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SUPT20HL2P0C7V6 817 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 CYP2C9P11712 490 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 NCAM1P13591 858 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SOX11P35716 441 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PTPN9P43378 593 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 HK2P52789 917 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SP2Q02086 613 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PPIL2Q13356 520 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SUPT20HL1Q3ZLR7 823 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 CNSTQ6PJW8 725 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PIWIL3Q7Z3Z3 882 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 CCDC185Q8N715 623 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 DNAAF3Q8N9W5 541 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SPPL2BQ8TCT7 592 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 ZC3H15Q8WU90 426 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 SEPT8Q92599 483 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 KHSRPQ92945 711 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMG6-215ENST00000574501 TSNARE1Q96NA8 513 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 TBCBQ99426 244 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 MRPL4Q9BYD3 311 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 ADAMTS10Q9H324 1103 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 VRTNQ9H8Y1 702 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 LRRC40Q9H9A6 602 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 GBA2Q9HCG7 927 aaPredicted RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 CCM2LQ9NUG4 571 aaPredicted RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 POU2F3Q9UKI9 436 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SARDHQ9UL12 918 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 B3GNT3Q9Y2A9 372 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 TLL2Q9Y6L7 1015 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 KIAA1217Q5T5P2 1943 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 DHRS12A0PJE2 317 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 UBDO15205 165 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 MFSD11O43934 449 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PFKMP08237 780 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 SNRPB2P08579 225 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 CXCL8P10145 99 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 HSPA8P11142 646 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 ELK4P28324 431 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 OXTRP30559 389 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 ZBTB17Q13105 803 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 DNASE1L3Q13609 305 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 USP10Q14694 798 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 PHKG1Q16816 387 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PGS1Q32NB8 556 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 KCNMB4Q86W47 210 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 PACRGLQ8N7B6 248 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 C1orf127Q8N9H9 656 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 ANKRD52Q8NB46 1076 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 CXorf38Q8TB03 319 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 MAGEE2Q8TD90 523 aaPredicted RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 SNX19Q92543 992 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 MAELQ96JY0 434 aaKnown RBP14.55□□□□□ -0.08
SMG6-215ENST00000574501 OLFM1Q99784 485 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 TMEM39BQ9GZU3 492 aa14.55□□□□□ -0.08
SMG6-215ENST00000574501 GBA3Q9H227 469 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms