RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PCDH8O95206 1070 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 UGT2B4P06133 528 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 THEGLP0DJG4 465 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 GIMD1P0DJR0 217 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 TCF4P15884 667 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 IL1R2P27930 398 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 CLDN2P57739 230 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 SNRPD1P62314 119 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 RPS21P63220 83 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 ERMARDQ5T6L9 678 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 KIAA1161Q6NSJ0 714 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 SLC25A45Q8N413 288 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 NPWQ8N729 165 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 KLHDC7BQ96G42 594 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 EIF3CQ99613 913 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 KLHL11Q9NVR0 708 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 PCSK1NQ9UHG2 260 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 ITM2BQ9Y287 266 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 IGSF10Q6WRI0 2623 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 POM121BA6NF01 834 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 J3KR12 359 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 KRIT1O00522 736 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 INSIG1O15503 277 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 MAGEC1O60732 1142 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 PRAMEF11O60813 436 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 ITGAVP06756 1048 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 NDST2P52849 883 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 TPI1P60174 286 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 CAMK2BQ13554 666 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 DPYSQ14117 519 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 INAVAQ3KP66 663 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 TPRG1LQ5T0D9 272 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 FBXL19Q6PCT2 694 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 KDM7AQ6ZMT4 941 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 RFX8Q6ZV50 586 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 MARCH9Q86YJ5 346 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 PSTKQ8IV42 348 aaKnown RBP17.67■□□□□ 0.42
SMG6-214ENST00000573827 EID2Q8N6I1 236 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 ASB12Q8WXK4 309 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 RAB7BQ96AH8 199 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 ZNF653Q96CK0 615 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 GDAP1L1Q96MZ0 367 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 KLHL32Q96NJ5 620 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 OSBPL1AQ9BXW6 950 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 SLC39A8Q9C0K1 460 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 DHX35Q9H5Z1 703 aaKnown RBP17.67■□□□□ 0.42
SMG6-214ENST00000573827 DKK3Q9UBP4 350 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 FTSJ1Q9UET6 329 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 CAPN11Q9UMQ6 739 aa17.67■□□□□ 0.42
SMG6-214ENST00000573827 TSPAN11A1L157 253 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 IGLON5A6NGN9 336 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 TRIM38O00635 465 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 TSPAN6O43657 245 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 PAK4O96013 591 aaPredicted RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 GYPCP04921 128 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 MYBL1P10243 752 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 TIMP2P16035 220 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 ITIH2P19823 946 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 AKT2P31751 481 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 PCK1P35558 622 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 ACADVLP49748 655 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 UBASH3AP57075 661 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 DNAJC3Q13217 504 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 PROX2Q3B8N5 592 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 GDPD4Q6W3E5 623 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 KYAT3Q6YP21 454 aaKnown RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 TP53INP2Q8IXH6 220 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 RYBPQ8N488 228 aaPredicted RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 FEM1CQ96JP0 617 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 CNDP2Q96KP4 475 aaKnown RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 NSMCE3Q96MG7 304 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 LENG8Q96PV6 779 aaPredicted RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 CWC15Q9P013 229 aaKnown RBP17.66■□□□□ 0.42
SMG6-214ENST00000573827 PCDHGA1Q9Y5H4 931 aa17.66■□□□□ 0.42
SMG6-214ENST00000573827 URB1O60287 2271 aaKnown RBP17.65■□□□□ 0.42
SMG6-214ENST00000573827 TDRD6O60522 2096 aaKnown RBP17.65■□□□□ 0.42
SMG6-214ENST00000573827 GOLGA8CPA6NN73 597 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 EEF2KO00418 725 aaKnown RBP17.65■□□□□ 0.42
SMG6-214ENST00000573827 ENC1O14682 589 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 SDC3O75056 442 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 ERCC2P18074 760 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 RGRP47804 291 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 HCAR3P49019 387 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 PAPOLAP51003 745 aaKnown RBP17.65■□□□□ 0.42
SMG6-214ENST00000573827 RHOAP61586 193 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 ZBED6P86452 979 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 LRRC73Q5JTD7 316 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 ARHGAP36Q6ZRI8 547 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 Q6ZSR6 202 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 ZCCHC14Q8WYQ9 949 aaKnown RBP17.65■□□□□ 0.42
SMG6-214ENST00000573827 EXOC2Q96KP1 924 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 UCKL1Q9NWZ5 548 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 SCINQ9Y6U3 715 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms