RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PDS5AQ29RF7 1337 aaKnown RBP5.23□□□□□ -1.57
CDC27-215ENST00000573550 STRCQ7RTU9 1775 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 CASZ1Q86V15 1759 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TNRC6CQ9HCJ0 1690 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 ZMYM2Q9UBW7 1377 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 CCDC196A0A1B0GTZ2 297 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 SYT5O00445 386 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 ATP8B1O43520 1251 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 SLU7O95391 586 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 ENO1P06733 434 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 H2AFXP16104 143 aaPredicted RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 IFNAR1P17181 557 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 AKT1P31749 480 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 PTGER1P34995 402 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 SYKP43405 635 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 FAM3BP58499 235 aaPredicted RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 TIMM10P62072 90 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TUBB4BP68371 445 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 HNRNPA0Q13151 305 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 MTA1Q13330 715 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 STIM1Q13586 685 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TRIM29Q14134 588 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 BRD3Q15059 726 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 RBMS2Q15434 407 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 PFKFB4Q16877 469 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TRIM60Q495X7 471 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 RILPL1Q5EBL4 403 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 PXDC1Q5TGL8 231 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 RHPN2Q8IUC4 686 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 VSTM4Q8IW00 320 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 UEVLDQ8IX04 471 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 KRT222Q8N1A0 295 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TMTC2Q8N394 836 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 SAMD3Q8N6K7 520 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 NANOGP1Q8N7R0 232 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 MLKLQ8NB16 471 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 SPATA20Q8TB22 786 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 BCAS4Q8TDM0 211 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 ZFPM2Q8WW38 1151 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 EID2BQ96D98 161 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 MPHOSPH8Q99549 860 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 PYM1Q9BRP8 204 aaKnown RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 SCNM1Q9BWG6 230 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 KRT23Q9C075 422 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 FTOQ9C0B1 505 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC27-215ENST00000573550 FOXP1Q9H334 677 aaPredicted RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 RNF41Q9H4P4 317 aaPredicted RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 TMOD3Q9NYL9 352 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 TAGLN3Q9UI15 199 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 NFU1Q9UMS0 254 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 COL24A1Q17RW2 1714 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 COL16A1Q07092 1604 aaPredicted RBP5.22□□□□□ -1.57
CDC27-215ENST00000573550 UBN2Q6ZU65 1347 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 EMSYQ7Z589 1322 aa5.22□□□□□ -1.57
CDC27-215ENST00000573550 MYH13Q9UKX3 1938 aa5.21□□□□□ -1.57
CDC27-215ENST00000573550 ANKRD18BA2A2Z9 1011 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A18PA6NE21 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A16PA6NEW6 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A9PA6NNJ1 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A5PA8MXJ8 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 KIF28PB7ZC32 967 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 ZBTB43O43298 467 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 ZSCAN12O43309 604 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 SKAP2O75563 359 aaPredicted RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 CD63P08962 238 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A15PP0C7V4 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FAM90A14PP0C7W9 464 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 CYP19A1P11511 503 aaPredicted RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 ZNF18P17022 549 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 IGFBP2P18065 325 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 SLC12A2P55011 1212 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 SLC37A1P57057 533 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 FOXL2P58012 376 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 RPL15P61313 204 aaKnown RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 TLE3Q04726 772 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 TUBB2AQ13885 445 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 ZACNQ401N2 412 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 GLE1Q53GS7 698 aaKnown RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 ANKRD40Q6AI12 368 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 TTLL5Q6EMB2 1281 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 LIN54Q6MZP7 749 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 ARMCX5Q6P1M9 558 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 WDR93Q6P2C0 686 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 PGBD2Q6P3X8 592 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 KRBA2Q6ZNG9 492 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 TOM1L2Q6ZVM7 507 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 BRINP3Q76B58 766 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 TBC1D10CQ8IV04 446 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 RSC1A1Q92681 617 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 MPHOSPH6Q99547 160 aaKnown RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 MECRQ9BV79 373 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 TUBB2BQ9BVA1 445 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 KATNAL1Q9BW62 490 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 LRRC2Q9BYS8 371 aa5.21□□□□□ -1.58
CDC27-215ENST00000573550 XPO4Q9C0E2 1151 aaKnown RBP5.21□□□□□ -1.58
CDC27-215ENST00000573550 HSD3B7Q9H2F3 369 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms