RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RXRGP48443 463 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 NDST2P52849 883 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 TTC7BQ86TV6 843 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 FNIP1Q8TF40 1166 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 SLC39A8Q9C0K1 460 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 FAM221BA6H8Z2 402 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 ARHGAP42A6NI28 874 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 A6NNZ2 444 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 EIF3CLB5ME19 914 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 J3KR12 359 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 FPGTO14772 594 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 INSIG1O15503 277 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 LRCH4O75427 683 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 PIGNO95427 931 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 SERPING1P05155 500 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 TPM3P06753 285 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 ERCC2P18074 760 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 XPAP23025 273 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 PAPOLAP51003 745 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 FGL2Q14314 439 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 CYTH1Q15438 398 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 SMTNL2Q2TAL5 461 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 HS1BP3Q53T59 392 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 CFAP58Q5T655 872 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 DHRS13Q6UX07 377 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 Q6ZSR6 202 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 HSPH1Q92598 858 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 EIF3CQ99613 913 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 SP110Q9HB58 689 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 IPO11Q9UI26 975 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.87□□□□□ -0.35
NPLOC4-213ENST00000573519 RAD51BO15315 384 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 FFAR2O15552 330 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 PALMO75781 387 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 ZNF542PQ5EBM4 170 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 CCNI2Q6ZMN8 369 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 ABI3BPQ7Z7G0 1075 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 IQCDQ96DY2 449 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 BTBD6Q96KE9 485 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 PDFQ9HBH1 243 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 ANAPC7Q9UJX3 599 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
NPLOC4-213ENST00000573519 A0A087X0T9 212 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 FAM149AA5PLN7 773 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 POM121BA6NF01 834 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 H3BRJ5 948 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 MMP20O60882 483 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 RFPL3O75679 317 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 DKK1O94907 266 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 FAM228BP0C875 321 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 TCF4P15884 667 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 ITIH2P19823 946 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 PCK1P35558 622 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 ARL4AP40617 200 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 RABIFP47224 123 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 CCDC122Q5T0U0 273 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 ARHGAP36Q6ZRI8 547 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 VSTM4Q8IW00 320 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 NPWQ8N729 165 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 VOPP1Q96AW1 172 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 BMFQ96LC9 184 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 C1QTNF2Q9BXJ5 285 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms