RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 BBS5Q8N3I7 341 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 CKAP2Q8WWK9 683 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 APOPT1Q96IL0 206 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 FEM1AQ9BSK4 669 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 IARS2Q9NSE4 1012 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 PCMTD2Q9NV79 361 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 TXNDC16Q9P2K2 825 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 REV3LO60673 3130 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 TCP11X1B4DZS4 312 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 TMCC1O94876 653 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 PRKCGP05129 697 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 VIMP08670 466 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 DRD4P21917 467 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ADRA1DP25100 572 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 HOXA9P31269 272 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 GP5P40197 560 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 SERPINH1P50454 418 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 SCNN1BP51168 640 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC18A2Q05940 514 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 SF3A3Q12874 501 aaKnown RBP eCLIP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 FRG1Q14331 258 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 GALNT3Q14435 633 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 CYTH1Q15438 398 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 TEDDM1Q5T9Z0 273 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 CDHR3Q6ZTQ4 885 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ING5Q8WYH8 240 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ALKBH8Q96BT7 664 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 MTBPQ96DY7 904 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 VPS51Q9UID3 782 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 OR51B4Q9Y5P0 310 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ATG2AQ2TAZ0 1938 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 XYLBO75191 536 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZWINTO95229 277 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 VAPBO95292 243 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 TOP3BO95985 862 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ALDOAP04075 364 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ITGA2BP08514 1039 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 SERPINF2P08697 491 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ARNTP27540 789 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 FOXN2P32314 431 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 NEK3P51956 506 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC18A1P54219 525 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CNGA3Q16281 694 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF449Q6P9G9 518 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF783Q6ZMS7 281 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 STRA8Q7Z7C7 330 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 USP13Q92995 863 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CPNE1Q99829 537 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC13A1Q9BZW2 595 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 TASP1Q9H6P5 420 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF510Q9Y2H8 683 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 MYOFQ9NZM1 2061 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CCDC195A0A1B0GUA6 201 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 LOC285095A0A1B0GVY8 99 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 TPP1O14773 563 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 PIRTP0C851 137 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CCNFP41002 786 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ERVK-21P61565 698 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 IL9RQ01113 521 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CDK18Q07002 472 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 MSLNQ13421 630 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 HHATQ5VTY9 493 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 PDPK2PQ6A1A2 396 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF707Q96C28 371 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ALG14Q96F25 216 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 FEM1CQ96JP0 617 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 SRPK1Q96SB4 655 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 PRKAG3Q9UGI9 489 aa12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 FCF1Q9Y324 198 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-213ENST00000572405 COPEO14579 308 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 FGF19O95750 216 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 MT-CO1P00395 513 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 CEBPBP17676 345 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 PFKLP17858 780 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 CR2P20023 1033 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 CNTFP26441 200 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 ARCN1P48444 511 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 CBX2Q14781 532 aaPredicted RBP12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 MPPE1Q53F39 396 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 PRSS36Q5K4E3 855 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
TOM1L1-213ENST00000572405 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms