RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SMAD1Q15797 465 aaKnown RBP14.01□□□□□ -0.17
RPAIN-209ENST00000571558 HLA-BQ31612 363 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 MPP7Q5T2T1 576 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 FYB2Q5VWT5 728 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 CHST9Q7L1S5 443 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 UMODL1-AS1Q8N2C9 162 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.01□□□□□ -0.17
RPAIN-209ENST00000571558 ATG4AQ8WYN0 398 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 TOE1Q96GM8 510 aaKnown RBP14.01□□□□□ -0.17
RPAIN-209ENST00000571558 CARD6Q9BX69 1037 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 BBS2Q9BXC9 721 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 NOL6Q9H6R4 1146 aaKnown RBP14.01□□□□□ -0.17
RPAIN-209ENST00000571558 PTPRBP23467 1997 aa14.01□□□□□ -0.17
RPAIN-209ENST00000571558 A0A1B0GVM2 712 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 TCAF2A6NFQ2 919 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 CAPN8A6NHC0 703 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 PRRT4C9JH25 899 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 ATXN7O15265 892 aaPredicted RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 CLDN11O75508 207 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 PENKP01210 267 aaPredicted RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 IGLV3-19P01714 112 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 ATXN1LP0C7T5 689 aaKnown RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 HOXD9P28356 352 aaPredicted RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 NR2C2P49116 596 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 MAPKAPK2P49137 400 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 DGKGP49619 791 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 CDH4P55283 916 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 OTUD4Q01804 1114 aaKnown RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 NOMO1Q15155 1222 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 CCNG2Q16589 344 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 MPPE1Q53F39 396 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 KIAA1324Q6UXG2 1013 aaKnown RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 TFAP2DQ7Z6R9 452 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 TP53INP2Q8IXH6 220 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 ZCCHC9Q8N567 271 aaKnown RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 TTC13Q8NBP0 860 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 HJURPQ8NCD3 748 aaPredicted RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 SLC35B2Q8TB61 432 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 ACTL9Q8TC94 416 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 SLC39A7Q92504 469 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 P3H4Q92791 437 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 HAUS1Q96CS2 278 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 TMA16Q96EY4 203 aaKnown RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 OLFM3Q96PB7 478 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 GPR174Q9BXC1 333 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 FRMD8P1Q9BZ68 369 aaPredicted RBP14□□□□□ -0.17
RPAIN-209ENST00000571558 LRRC19Q9H756 370 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 TBC1D30Q9Y2I9 924 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 HEY1Q9Y5J3 304 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 DOCK4Q8N1I0 1966 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 MYOFQ9NZM1 2061 aa14□□□□□ -0.17
RPAIN-209ENST00000571558 NEDD8-MDP1E9PL57 170 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 TRIM24O15164 1050 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 LIASO43766 372 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 TBL1XO60907 577 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 CDK4P11802 303 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 GRK6P43250 576 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 AFF3P51826 1226 aaKnown RBP13.99□□□□□ -0.17
RPAIN-209ENST00000571558 ENPP2Q13822 863 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 OASLQ15646 514 aaKnown RBP13.99□□□□□ -0.17
RPAIN-209ENST00000571558 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
RPAIN-209ENST00000571558 TTC27Q6P3X3 843 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 DRICH1Q6PGQ1 229 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-209ENST00000571558 TMPRSS12Q86WS5 348 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 LRRN4CLQ8ND94 238 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 OR52K2Q8NGK3 314 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 C1orf54Q8WWF1 131 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 MIR1-1HGQ9H1L0 117 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 IL21RQ9HBE5 538 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 HOMER3Q9NSC5 361 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 FBXO10Q9UK96 956 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 FNDC3AQ9Y2H6 1198 aaKnown RBP13.99□□□□□ -0.17
RPAIN-209ENST00000571558 SLC27A6Q9Y2P4 619 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 RAD54BQ9Y620 910 aa13.99□□□□□ -0.17
RPAIN-209ENST00000571558 CCDC188H7C350 402 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 PHF2O75151 1096 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 ZIC2O95409 532 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-209ENST00000571558 SERPINB6P35237 376 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 TPMTP51580 245 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 NDST2P52849 883 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 C2orf54Q08AI8 447 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 GALNT2Q10471 571 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 PTPRNQ16849 979 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 FUT11Q495W5 492 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 MNS1Q8NEH6 495 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 C1orf216Q8TAB5 229 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 SLC39A8Q9C0K1 460 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 DONSONQ9NYP3 566 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 DNPEPQ9ULA0 475 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 STON1Q9Y6Q2 735 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 GOLGA6L10A0A0M3HER8 536 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
RPAIN-209ENST00000571558 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
RPAIN-209ENST00000571558 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms