RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 IFT43Q96FT9 208 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 HMCESQ96FZ2 354 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 BPIFA3Q9BQP9 254 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 ABCG4Q9H172 646 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 UBA2Q9UBT2 640 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 AP4E1Q9UPM8 1137 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
NPLOC4-204ENST00000570324 TRPM6Q9BX84 2022 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 POM121BA6NF01 834 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ARHGAP42A6NI28 874 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 EIF3CLB5ME19 914 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 TRIM38O00635 465 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 PRPSAP2O60256 369 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 MMP20O60882 483 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 CD160O95971 181 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ACP1P24666 158 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ABL2P42684 1182 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 NDST2P52849 883 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 CLDN6P56747 220 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 KLHL30Q0D2K2 578 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ELP6Q0PNE2 266 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 TARDBPQ13148 414 aaKnown RBP eCLIP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 MAMLD1Q13495 774 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 GRM3Q14832 879 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 PPP6R3Q5H9R7 873 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 LRRC73Q5JTD7 316 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ARTNQ5T4W7 220 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ERMARDQ5T6L9 678 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 KANSL1Q7Z3B3 1105 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 VPS36Q86VN1 386 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 PARGQ86W56 976 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 UMODL1-AS1Q8N2C9 162 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 NETO2Q8NC67 525 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 DENND6BQ8NEG7 585 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 BTN2A2Q8WVV5 523 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ASB12Q8WXK4 309 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 TSC1Q92574 1164 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 TRIM11Q96F44 468 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 EXOC2Q96KP1 924 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 BMFQ96LC9 184 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 DCBLD2Q96PD2 775 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 LENG8Q96PV6 779 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 EIF3CQ99613 913 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 DUSP23Q9BVJ7 150 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 C1QTNF2Q9BXJ5 285 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 HAUS4Q9H6D7 363 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 SP110Q9HB58 689 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 MRPL47Q9HD33 250 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 GPATCH2LQ9NWQ4 482 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 UCKL1Q9NWZ5 548 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 NLGN3Q9NZ94 848 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 MYO1AQ9UBC5 1043 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 CNOT8Q9UFF9 292 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 PCSK1NQ9UHG2 260 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 CLCA2Q9UQC9 943 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 ITM2BQ9Y287 266 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 SCINQ9Y6U3 715 aa9.05□□□□□ -0.96
NPLOC4-204ENST00000570324 TDRD6O60522 2096 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 USP24Q9UPU5 2620 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 LAMA1P25391 3075 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SPTY2D1-AS1A0A0U1RR47 76 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 A0A1W2PQC6 194 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 TCRBV5S1A1TA0A578 114 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 GOLGA6L19H0YKK7 550 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 DFFAO00273 331 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SCAMP1O15126 338 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 RAD51BO15315 384 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 ATMINO43313 823 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 PALMO75781 387 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CSF2P04141 144 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CAPNS1P04632 268 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 GZMAP12544 262 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 JUNDP17535 347 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SUOXP51687 545 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SEMG2Q02383 582 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SERINC3Q13530 473 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 COL28A1Q2UY09 1125 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 FAXCQ5TGI0 409 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 ERAP2Q6P179 960 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 KDM7AQ6ZMT4 941 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SLC22A18ASQ8N1D0 253 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 LMX1AQ8TE12 382 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 BAP1Q92560 729 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 GLMNQ92990 594 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 ZNF653Q96CK0 615 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CELF6Q96J87 481 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 APOLD1Q96LR9 279 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms