RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 RAB23Q9ULC3 237 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 PACSIN2Q9UNF0 486 aaPredicted RBP8.21□□□□□ -1.1
RAB11A-209ENST00000569896 NCKAP1Q9Y2A7 1128 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 PCDHGA2Q9Y5H1 932 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 PCDHA3Q9Y5H8 950 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 ACTL7AQ9Y615 435 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 CAPN6Q9Y6Q1 641 aa8.21□□□□□ -1.1
RAB11A-209ENST00000569896 TP53BP1Q12888 1972 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 FRYLO94915 3013 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CCDC163A0A0D9SF12 145 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 C3orf70A6NLC5 250 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ZNF487B1APH4 448 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 KRIT1O00522 736 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 MCF2LO15068 1137 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 MFSD11O43934 449 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CST8O60676 142 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 NDUFS2O75306 463 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ZNF217O75362 1048 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 TMCC1O94876 653 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 KRT10P13645 584 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CTNNA2P26232 953 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CNR2P34972 360 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CDKN2BP42772 138 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 PSMD8P48556 350 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 COPAP53621 1224 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 RHOAP61586 193 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 RPS14P62263 151 aaKnown RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 RAD51Q06609 339 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 IL10RBQ08334 325 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 SRSF5Q13243 272 aaKnown RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 SIM2Q14190 667 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ELAVL3Q14576 367 aaKnown RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 PAFAH1B3Q15102 231 aaKnown RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 LRRK1Q38SD2 2015 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 INO80DQ53TQ3 878 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CARD16Q5EG05 197 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 AFMIDQ63HM1 303 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 NCBP2-AS2Q69YL0 99 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ARHGAP36Q6ZRI8 547 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ZNF662Q6ZS27 426 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 VSIG1Q86XK7 387 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ARHGAP12Q8IWW6 846 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 TP53INP2Q8IXH6 220 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 BBS5Q8N3I7 341 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 PQLC3Q8N755 202 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 PAF1Q8N7H5 531 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 FRS2Q8WU20 508 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 GAB3Q8WWW8 586 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CASKIN2Q8WXE0 1202 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 FAF2Q96CS3 445 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 OMDQ99983 421 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CINPQ9BW66 212 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CEP44Q9C0F1 390 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 RSPH9Q9H1X1 276 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ZDHHC6Q9H6R6 413 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 TRMT1Q9NXH9 659 aaKnown RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 CYP8B1Q9UNU6 501 aa8.2□□□□□ -1.1
RAB11A-209ENST00000569896 ZFHX2Q9C0A1 2572 aaPredicted RBP8.2□□□□□ -1.1
RAB11A-209ENST00000569896 TNRC6BQ9UPQ9 1833 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 C1QTNF3-AMACRE9PGA6 284 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 KPNA3O00505 521 aaPredicted RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ALOX15BO15296 676 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 RNASEH2AO75792 299 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 POP4O95707 220 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 CD160O95971 181 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 IGSF6O95976 241 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 PRNPP04156 253 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 MX2P20592 715 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 CHRNA3P32297 505 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 SLC8A1P32418 973 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 DEKP35659 375 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 TPMTP51580 245 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 GBE1Q04446 702 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ITKQ08881 620 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 AP1B1Q10567 949 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ZNF235Q14590 738 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 RPS6KA1Q15418 735 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 CST6Q15828 149 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 POM121L1PQ3SYA9 428 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ATXN7L2Q5T6C5 722 aaPredicted RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 FAM46CQ5VWP2 391 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 DPY19L3Q6ZPD9 716 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 BZW1Q7L1Q6 419 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 LRRC49Q8IUZ0 686 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ZBTB44Q8NCP5 570 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 OR2A12Q8NGT7 310 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 PIP4K2CQ8TBX8 421 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 GRIN3AQ8TCU5 1115 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 P3H4Q92791 437 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 NELL1Q92832 810 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ISG20Q96AZ6 181 aaKnown RBP8.19□□□□□ -1.1
RAB11A-209ENST00000569896 GDAP1L1Q96MZ0 367 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 ZNF599Q96NL3 588 aa8.19□□□□□ -1.1
RAB11A-209ENST00000569896 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms