RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CIR1Q86X95 450 aaPredicted RBP8.81□□□□□ -1
SMG1-216ENST00000569122 HID1Q8IV36 788 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CACNA2D3Q8IZS8 1091 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CHST14Q8NCH0 376 aa8.81□□□□□ -1
SMG1-216ENST00000569122 GPR156Q8NFN8 814 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CLEC4CQ8WTT0 213 aa8.81□□□□□ -1
SMG1-216ENST00000569122 TEFMQ96QE5 360 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 PHF12Q96QT6 1004 aa8.81□□□□□ -1
SMG1-216ENST00000569122 DPYSL5Q9BPU6 564 aa8.81□□□□□ -1
SMG1-216ENST00000569122 DDA1Q9BW61 102 aa8.81□□□□□ -1
SMG1-216ENST00000569122 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 TCEAL2Q9H3H9 227 aaPredicted RBP8.81□□□□□ -1
SMG1-216ENST00000569122 CAAP1Q9H8G2 361 aa8.81□□□□□ -1
SMG1-216ENST00000569122 FAM204AQ9H8W3 233 aa8.81□□□□□ -1
SMG1-216ENST00000569122 PRDM8Q9NQV8 689 aa8.81□□□□□ -1
SMG1-216ENST00000569122 LRIT1Q9P2V4 623 aa8.81□□□□□ -1
SMG1-216ENST00000569122 USP25Q9UHP3 1055 aa8.81□□□□□ -1
SMG1-216ENST00000569122 VPS51Q9UID3 782 aa8.81□□□□□ -1
SMG1-216ENST00000569122 RABGEF1Q9UJ41 708 aa8.81□□□□□ -1
SMG1-216ENST00000569122 VANGL2Q9ULK5 521 aa8.81□□□□□ -1
SMG1-216ENST00000569122 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
SMG1-216ENST00000569122 ANKRD17O75179 2603 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 NBASA2RRP1 2371 aa8.8□□□□□ -1
SMG1-216ENST00000569122 SPTBN1Q01082 2364 aaKnown RBP8.8□□□□□ -1
SMG1-216ENST00000569122 EFCAB7A8K855 629 aa8.8□□□□□ -1
SMG1-216ENST00000569122 MKRN2OSH3BPM6 223 aa8.8□□□□□ -1
SMG1-216ENST00000569122 MTSS1O43312 755 aa8.8□□□□□ -1
SMG1-216ENST00000569122 GABBR2O75899 941 aa8.8□□□□□ -1
SMG1-216ENST00000569122 LIFP15018 202 aa8.8□□□□□ -1
SMG1-216ENST00000569122 UGT1A3P35503 534 aa8.8□□□□□ -1
SMG1-216ENST00000569122 DNA2P51530 1060 aa8.8□□□□□ -1
SMG1-216ENST00000569122 SNX16P57768 344 aa8.8□□□□□ -1
SMG1-216ENST00000569122 RAB15P59190 212 aa8.8□□□□□ -1
SMG1-216ENST00000569122 CETN1Q12798 172 aa8.8□□□□□ -1
SMG1-216ENST00000569122 EIF4EBP2Q13542 120 aaPredicted RBP8.8□□□□□ -1
SMG1-216ENST00000569122 PEX6Q13608 980 aa8.8□□□□□ -1
SMG1-216ENST00000569122 CUL4AQ13619 759 aa8.8□□□□□ -1
SMG1-216ENST00000569122 MEA1Q16626 185 aa8.8□□□□□ -1
SMG1-216ENST00000569122 C5orf22Q49AR2 442 aa8.8□□□□□ -1
SMG1-216ENST00000569122 ZNF805Q5CZA5 627 aa8.8□□□□□ -1
SMG1-216ENST00000569122 TCERG1LQ5VWI1 586 aa8.8□□□□□ -1
SMG1-216ENST00000569122 SPRED1Q7Z699 444 aa8.8□□□□□ -1
SMG1-216ENST00000569122 SLITRK4Q8IW52 837 aa8.8□□□□□ -1
SMG1-216ENST00000569122 GUF1Q8N442 669 aaKnown RBP8.8□□□□□ -1
SMG1-216ENST00000569122 AGBL5Q8NDL9 886 aa8.8□□□□□ -1
SMG1-216ENST00000569122 KIAA1524Q8TCG1 905 aa8.8□□□□□ -1
SMG1-216ENST00000569122 CXorf40AQ8TE69 158 aa8.8□□□□□ -1
SMG1-216ENST00000569122 JPH3Q8WXH2 748 aaPredicted RBP8.8□□□□□ -1
SMG1-216ENST00000569122 TFAP2BQ92481 460 aa8.8□□□□□ -1
SMG1-216ENST00000569122 ISG20Q96AZ6 181 aaKnown RBP8.8□□□□□ -1
SMG1-216ENST00000569122 PAGE5Q96GU1 130 aa8.8□□□□□ -1
SMG1-216ENST00000569122 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
SMG1-216ENST00000569122 TNKS2Q9H2K2 1166 aa8.8□□□□□ -1
SMG1-216ENST00000569122 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
SMG1-216ENST00000569122 GPN2Q9H9Y4 310 aaPredicted RBP8.8□□□□□ -1
SMG1-216ENST00000569122 DDIT4Q9NX09 232 aa8.8□□□□□ -1
SMG1-216ENST00000569122 KCTD3Q9Y597 815 aa8.8□□□□□ -1
SMG1-216ENST00000569122 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
SMG1-216ENST00000569122 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
SMG1-216ENST00000569122 C16orf96A6NNT2 1141 aa8.79□□□□□ -1
SMG1-216ENST00000569122 K7ERQ8 282 aa8.79□□□□□ -1
SMG1-216ENST00000569122 CASC3O15234 703 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 MED7O43513 233 aa8.79□□□□□ -1
SMG1-216ENST00000569122 SMAD6O43541 496 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 SNAP91O60641 907 aa8.79□□□□□ -1
SMG1-216ENST00000569122 RAD1O60671 282 aa8.79□□□□□ -1
SMG1-216ENST00000569122 KRT7P08729 469 aa8.79□□□□□ -1
SMG1-216ENST00000569122 VARSP26640 1264 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 CSTF2P33240 577 aaKnown RBP eCLIP8.79□□□□□ -1
SMG1-216ENST00000569122 ETFBP38117 255 aa8.79□□□□□ -1
SMG1-216ENST00000569122 GPD2P43304 727 aa8.79□□□□□ -1
SMG1-216ENST00000569122 ME1P48163 572 aa8.79□□□□□ -1
SMG1-216ENST00000569122 SERPINH1P50454 418 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 SUOXP51687 545 aa8.79□□□□□ -1
SMG1-216ENST00000569122 CCNHP51946 323 aaPredicted RBP8.79□□□□□ -1
SMG1-216ENST00000569122 GEMIN4P57678 1058 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 SRP54P61011 504 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 RAD51Q06609 339 aa8.79□□□□□ -1
SMG1-216ENST00000569122 BIRC2Q13490 618 aa8.79□□□□□ -1
SMG1-216ENST00000569122 POLD3Q15054 466 aaPredicted RBP8.79□□□□□ -1
SMG1-216ENST00000569122 C14orf28Q4W4Y0 310 aa8.79□□□□□ -1
SMG1-216ENST00000569122 EFHC2Q5JST6 749 aa8.79□□□□□ -1
SMG1-216ENST00000569122 EFHC1Q5JVL4 640 aa8.79□□□□□ -1
SMG1-216ENST00000569122 TPRG1LQ5T0D9 272 aa8.79□□□□□ -1
SMG1-216ENST00000569122 DCAF12Q5T6F0 453 aa8.79□□□□□ -1
SMG1-216ENST00000569122 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
SMG1-216ENST00000569122 CAPRIN2Q6IMN6 1127 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 TCTN3Q6NUS6 607 aa8.79□□□□□ -1
SMG1-216ENST00000569122 ENPP7Q6UWV6 458 aa8.79□□□□□ -1
SMG1-216ENST00000569122 PARS2Q7L3T8 475 aaKnown RBP8.79□□□□□ -1
SMG1-216ENST00000569122 TAF8Q7Z7C8 310 aa8.79□□□□□ -1
SMG1-216ENST00000569122 TMEM110Q86TL2 294 aa8.79□□□□□ -1
SMG1-216ENST00000569122 TTC7BQ86TV6 843 aa8.79□□□□□ -1
SMG1-216ENST00000569122 VPS36Q86VN1 386 aa8.79□□□□□ -1
SMG1-216ENST00000569122 TICAM1Q8IUC6 712 aa8.79□□□□□ -1
SMG1-216ENST00000569122 FAM46DQ8NEK8 389 aa8.79□□□□□ -1
SMG1-216ENST00000569122 MOCOSQ96EN8 888 aa8.79□□□□□ -1
SMG1-216ENST00000569122 NT5C1BQ96P26 610 aa8.79□□□□□ -1
SMG1-216ENST00000569122 RBM15Q96T37 977 aaKnown RBP eCLIP8.79□□□□□ -1
SMG1-216ENST00000569122 PSMB7Q99436 277 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms