RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PNLIPRP1P54315 467 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 TAS2R50P59544 299 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CBFBQ13951 182 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ANXA2RQ3ZCQ2 193 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRIM60Q495X7 471 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CRY2Q49AN0 593 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 WDR93Q6P2C0 686 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC39A5Q6ZMH5 540 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZNF793Q6ZN11 406 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 MRPL10Q7Z7H8 261 aaKnown RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 UEVLDQ8IX04 471 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 NRSN1Q8IZ57 195 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ATG16L2Q8NAA4 619 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CLEC4CQ8WTT0 213 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRAPPC12Q8WVT3 735 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZFPM2Q8WW38 1151 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 DCPSQ96C86 337 aaKnown RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CDCA5Q96FF9 252 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 REXO5Q96IC2 774 aaKnown RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZFYVE19Q96K21 471 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 PIMREGQ9BSJ6 248 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CENPOQ9BU64 300 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 KATNAL1Q9BW62 490 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 SORBS1Q9BX66 1292 aaKnown RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 MAGEH1Q9H213 219 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 FOXP1Q9H334 677 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CCDC134Q9H6E4 229 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 RASSF1Q9NS23 344 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 BLOC1S4Q9NUP1 217 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 IFT80Q9P2H3 777 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC12A4Q9UP95 1085 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 CNTN6Q9UQ52 1028 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ATP6V0A2Q9Y487 856 aa3.68□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 LRRC37AA6NMS7 1700 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRBV5-3A0A0A0MS03 114 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 A0A0G2JK05 382 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC38A8A6NNN8 435 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZNF814B7Z6K7 855 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRIM38O00635 465 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 UGDHO60701 494 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SGPL1O95470 568 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 WNT1P04628 370 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 CYP3A4P08684 503 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 AKR1A1P14550 325 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TFEBP19484 476 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 EIF2S2P20042 333 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TNFRSF1BP20333 461 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 CNTFP26441 200 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC12A2P55011 1212 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 B4GALNT1Q00973 533 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TLE3Q04726 772 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SF3A3Q12874 501 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 AIMP1Q12904 312 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TNIP1Q15025 636 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZACNQ401N2 412 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MIDNQ504T8 468 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 EPHA10Q5JZY3 1008 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 GPATCH4Q5T3I0 446 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 AWAT2Q6E213 333 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 GATAD2AQ86YP4 633 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TMTC1Q8IUR5 882 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZNF34Q8IZ26 560 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ADGRF4Q8IZF3 695 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SRFBP1Q8NEF9 429 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SCAMP5Q8TAC9 235 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 SNRNP27Q8WVK2 155 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 WDR60Q8WVS4 1066 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 EID2BQ96D98 161 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MSI2Q96DH6 328 aaKnown RBP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 HMCESQ96FZ2 354 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 VCPIP1Q96JH7 1222 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 RMDN3Q96TC7 470 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ABHD14AQ9BUJ0 271 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MXD3Q9BW11 206 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRIM2Q9C040 744 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 NYXQ9GZU5 481 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZBTB40Q9NUA8 1239 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MSRB1Q9NZV6 116 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 LRFN1Q9P244 771 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 MAP3K15Q6ZN16 1313 aa3.67□□□□□ -1.82
HMGB1P6-201ENST00000569046 RTL9Q8NET4 1388 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 CYP3A7-CYP3A51PA0A087WV96 503 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 SYT5O00445 386 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 ACKR2O00590 384 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 TLX3O43711 291 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 ECE2O60344 883 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 POLBP06746 335 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 CYP21A2P08686 494 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 ALDOCP09972 364 aaKnown RBP3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 CKMT1AP12532 417 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 CYP3A7P24462 503 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 GRK5P34947 590 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 SERPINF1P36955 418 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 LAMB3Q13751 1172 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 LEXMQ3ZCV2 418 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 GLE1Q53GS7 698 aaKnown RBP3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 KIAA1755Q5JYT7 1200 aa3.66□□□□□ -1.82
HMGB1P6-201ENST00000569046 ASPHD1Q5U4P2 390 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms