RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FAM102AQ5T9C2 384 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 BNIPLQ7Z465 357 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 SLC47A2Q86VL8 602 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 FAM71AQ8IYT1 594 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 PHACTR4Q8IZ21 702 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 FSTL5Q8N475 847 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 CENPTQ96BT3 561 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 CCNL2Q96S94 520 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 DNAJC12Q9UKB3 198 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 ATXN7L1Q9ULK2 861 aaPredicted RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 HPCAL4Q9UM19 191 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 FCF1Q9Y324 198 aaKnown RBP16■□□□□ 0.15
HERPUD1-215ENST00000568676 PCDHGA7Q9Y5G6 932 aa16■□□□□ 0.15
HERPUD1-215ENST00000568676 COL27A1Q8IZC6 1860 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 FOXN3O00409 490 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 BIN1O00499 593 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 POP4O95707 220 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 LSM8O95777 96 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 MAPKAPK2P49137 400 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 NRG1Q02297 640 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 CLN3Q13286 438 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 ELOCQ15369 112 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 PERM1Q5SV97 790 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 MACC1Q6ZN28 852 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 SLC35F3Q8IY50 421 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 OR6C4Q8NGE1 309 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 OR2AP1Q8NGE2 309 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 CCDC3Q9BQI4 270 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 ACSL6Q9UKU0 697 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 PADI4Q9UM07 663 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 SNX10Q9Y5X0 201 aa15.99■□□□□ 0.15
HERPUD1-215ENST00000568676 ZSCAN5CA6NGD5 496 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 TMEM110-MUSTN1A8MSY1 372 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 AREL1O15033 823 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 SLC28A2O43868 658 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 GCATO75600 419 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 TM7SF2O76062 418 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 WISP1O95388 367 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 CD160O95971 181 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ALPIP09923 528 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ABL2P42684 1182 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 PEX5P50542 639 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 SUOXP51687 545 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ADKP55263 362 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 PPARDQ03181 441 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 RAD51Q06609 339 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ARTNQ5T4W7 220 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 TENM4Q6N022 2769 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 XYLT1Q86Y38 959 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 CREBRFQ8IUR6 639 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 DRC7Q8IY82 874 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 RYBPQ8N488 228 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 CASKIN2Q8WXE0 1202 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 ARHGEF2Q92974 986 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 LRRC61Q9BV99 259 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 TM6SF2Q9BZW4 377 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 STRADBQ9C0K7 418 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 MAGEH1Q9H213 219 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 CAAP1Q9H8G2 361 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 DOLKQ9UPQ8 538 aa15.98■□□□□ 0.15
HERPUD1-215ENST00000568676 DOCK4Q8N1I0 1966 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 KRIT1O00522 736 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 PLD2O14939 933 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 YY2O15391 372 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 GJB6O95452 261 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 RHOQP17081 205 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 FLT3P36888 993 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 PDX1P52945 283 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 INHBCP55103 352 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 APBA1Q02410 837 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 MYLK3Q32MK0 819 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 ZSCAN23Q3MJ62 389 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 TPRG1LQ5T0D9 272 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 KIAA1614Q5VZ46 1190 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 FOXR1Q6PIV2 292 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 TTC7BQ86TV6 843 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 RBFAQ8N0V3 343 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 CXorf40AQ8TE69 158 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 SIX2Q9NPC8 291 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 PLCB1Q9NQ66 1216 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 TMPRSS4Q9NRS4 437 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 OR12D3Q9UGF7 316 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 TMEM59LQ9UK28 342 aa15.97■□□□□ 0.15
HERPUD1-215ENST00000568676 ITGB2P05107 769 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 UGT2B4P06133 528 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 SFTPCP11686 197 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 CYP11B1P15538 503 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 TSHRP16473 764 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 HTR1BP28222 390 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 IGFALSP35858 605 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 EIF4A3P38919 411 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 MANEALQ5VSG8 457 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 CRTC1Q6UUV9 634 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 GDPD4Q6W3E5 623 aa15.96■□□□□ 0.15
HERPUD1-215ENST00000568676 VPS36Q86VN1 386 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms