RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 BUB1O43683 1085 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PRPSAP2O60256 369 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 RNF8O76064 485 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 TMCC1O94876 653 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PCDH8O95206 1070 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 POP4O95707 220 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 LDOC1O95751 146 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 IGSF6O95976 241 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ATXN1LP0C7T5 689 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 THEGLP0DJG4 465 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 CDK4P11802 303 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PRLRP16471 622 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PSMA2P25787 234 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 EPHA8P29322 1005 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 AKT2P31751 481 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PBX1P40424 430 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZNF135P52742 658 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 NDST2P52849 883 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 UBASH3AP57075 661 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 TPI1P60174 286 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 RPS21P63220 83 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 FANCCQ00597 558 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 OGDHQ02218 1023 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 RAD51Q06609 339 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 SERINC3Q13530 473 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 GRM3Q14832 879 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ACAP1Q15027 740 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 SHBQ15464 509 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZNF284Q2VY69 593 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 MYLK3Q32MK0 819 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 TMEM259Q4ZIN3 620 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 INO80DQ53TQ3 878 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZNF805Q5CZA5 627 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 PRAMEF14Q5SWL7 426 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ERMARDQ5T6L9 678 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 E4F1Q66K89 784 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 SEL1L3Q68CR1 1132 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 CCNI2Q6ZMN8 369 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 PARS2Q7L3T8 475 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 LUZP1Q86V48 1076 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 VPS36Q86VN1 386 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 SPATS2Q86XZ4 545 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 DCP2Q8IU60 420 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 PSTKQ8IV42 348 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 UMODL1-AS1Q8N2C9 162 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 GALNT15Q8N3T1 639 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 RYBPQ8N488 228 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 SYN2Q92777 582 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 KLK6Q92876 244 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZDHHC16Q969W1 377 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZNF653Q96CK0 615 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ARHGEF26Q96DR7 871 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 IQCDQ96DY2 449 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 IFT43Q96FT9 208 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 HMCESQ96FZ2 354 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 KLHDC7BQ96G42 594 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 FEM1CQ96JP0 617 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 LENG8Q96PV6 779 aaPredicted RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 TMUB1Q9BVT8 246 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 SLC17A9Q9BYT1 436 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ISCUQ9H1K1 167 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 DHX35Q9H5Z1 703 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 LRRC19Q9H756 370 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 CBX8Q9HC52 389 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 MRPL47Q9HD33 250 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 FZD3Q9NPG1 666 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 CNOT8Q9UFF9 292 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 RABGEF1Q9UJ41 708 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 AP4E1Q9UPM8 1137 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ZFR2Q9UPR6 939 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 MFHAS1Q9Y4C4 1052 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 FADS3Q9Y5Q0 445 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 ACTL7AQ9Y615 435 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 HS3ST3A1Q9Y663 406 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 BPTFQ12830 3046 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 KNL1Q8NG31 2342 aa4.86□□□□□ -1.63
CLK3-219ENST00000567805 DSPP15924 2871 aaKnown RBP4.86□□□□□ -1.63
CLK3-219ENST00000567805 ARID1BQ8NFD5 2236 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 TPRP12270 2363 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 ARHGAP42A6NI28 874 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 C16orf96A6NNT2 1141 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 A6NNZ2 444 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 EEF2KO00418 725 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 NEMP1O14524 444 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ENC1O14682 589 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 DAPK3O43293 454 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 LRCH4O75427 683 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PAK4O96013 591 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 SERPING1P05155 500 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 UGT2B4P06133 528 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 TPM3P06753 285 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 C1SP09871 688 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 SKILP12757 684 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 MIPP30301 263 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GKP32189 559 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PCK1P35558 622 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 RABIFP47224 123 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 HCAR3P49019 387 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms