RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PPHLN1Q8NEY8 458 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 PLD4Q96BZ4 506 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 MMADHCQ9H3L0 296 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 C20orf96Q9NUD7 363 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 J3KR12 359 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 TIMM44O43615 452 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 LAG3P18627 525 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 NMBRP28336 390 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 PPP3CCP48454 512 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 SLC11A2P49281 568 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 HARS2P49590 506 aaKnown RBP23.55■■□□□ 1.36
LINC00543-201ENST00000567234 CUL3Q13618 768 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 HSP90AA5PQ58FG0 334 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 ATG16L1Q676U5 607 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 MCMBPQ9BTE3 642 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 TRPM5Q9NZQ8 1165 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 SLC4A7Q9Y6M7 1214 aa23.55■■□□□ 1.36
LINC00543-201ENST00000567234 C2CD2LO14523 706 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 OR1E1P30953 314 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 ALDH1A3P47895 512 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 SERPINB8P50452 374 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 KCNQ1P51787 676 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 RAB33AQ14088 237 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 PDE1CQ14123 709 aaPredicted RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 KPNB1Q14974 876 aaKnown RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 MUM1Q2TAK8 710 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 OR52E8Q6IFG1 317 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 FAM117BQ6P1L5 589 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 TMEM154Q6P9G4 183 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 C16orf59Q7L2K0 433 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 C10orf82Q8WW14 230 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 BADQ92934 168 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 PSMG2Q969U7 264 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 ERP27Q96DN0 273 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 NR1H4Q96RI1 486 aaPredicted RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 TBC1D10AQ9BXI6 508 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 TRIM4Q9C037 500 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 ATP13A1Q9HD20 1204 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 IL1RAPL1Q9NZN1 696 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 MAFFQ9ULX9 164 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 ANAPC1Q9H1A4 1944 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 MYLKQ15746 1914 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 PMPCBO75439 489 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 SYN1P17600 705 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 BGNP21810 368 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 WNT3AP56704 352 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 SLC10A7Q0GE19 358 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 TRIM68Q6AZZ1 485 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 OTOP2Q7RTS6 562 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 GPR65Q8IYL9 337 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 SLC7A6OSQ96CW6 309 aaPredicted RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 PRKD2Q9BZL6 878 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 NACA2Q9H009 215 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 ALG13Q9NP73 1137 aaKnown RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 NT5MQ9NPB1 228 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 GGT7Q9UJ14 662 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 TCAF1Q9Y4C2 921 aa23.54■■□□□ 1.36
LINC00543-201ENST00000567234 MRPL42Q9Y6G3 142 aaKnown RBP23.54■■□□□ 1.36
LINC00543-201ENST00000567234 MAGEA13PA6NCF6 341 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 BPGMP07738 259 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 TYK2P29597 1187 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 DDX53Q86TM3 631 aaKnown RBP23.53■■□□□ 1.36
LINC00543-201ENST00000567234 NUDCD3Q8IVD9 361 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 CNTN4Q8IWV2 1026 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 LGI2Q8N0V4 545 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.53■■□□□ 1.36
LINC00543-201ENST00000567234 TADA1Q96BN2 335 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 ZNF599Q96NL3 588 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 AGAP2Q99490 1192 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 TRIM55Q9BYV6 548 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 CYP4F11Q9HBI6 524 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 SPG21Q9NZD8 308 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 TRIM33Q9UPN9 1127 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 CHKBQ9Y259 395 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 YIPF1Q9Y548 306 aa23.53■■□□□ 1.36
LINC00543-201ENST00000567234 COCHO43405 550 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 MPOP05164 745 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 VEPH1Q14D04 833 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 RABGAP1LQ5R372 815 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 FSTL4Q6MZW2 842 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 LONP2Q86WA8 852 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 DCLK2Q8N568 766 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 E2F7Q96AV8 911 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 PABPC5Q96DU9 382 aaKnown RBP23.52■■□□□ 1.36
LINC00543-201ENST00000567234 RANBP9Q96S59 729 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 MAGEH1Q9H213 219 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 PRAMEF11O60813 436 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 URODP06132 367 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 PAMP19021 973 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 WDR5P61964 334 aaKnown RBP23.52■■□□□ 1.36
LINC00543-201ENST00000567234 BTG3Q14201 252 aaPredicted RBP23.52■■□□□ 1.36
LINC00543-201ENST00000567234 POU6F1Q14863 301 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 UGP2Q16851 508 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 TMCO4Q5TGY1 634 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 KCNV2Q8TDN2 545 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 C7orf26Q96N11 449 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 IL23AQ9NPF7 189 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 SNX15Q9NRS6 342 aa23.52■■□□□ 1.36
LINC00543-201ENST00000567234 IARS2Q9NSE4 1012 aaKnown RBP23.52■■□□□ 1.36
LINC00543-201ENST00000567234 SIN3BO75182 1162 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms