RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 MAD2L1Q13257 205 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 ORC1Q13415 861 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SMCO1Q147U7 214 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 OLFML2AQ68BL7 652 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ARPINQ7Z6K5 226 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ITPKCQ96DU7 683 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GPER1Q99527 375 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ARHGAP28Q9P2N2 729 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 FETUBQ9UGM5 382 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 LTN1O94822 1766 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 EFCAB10A6NFE3 127 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TCEA1P23193 301 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 SERPINA4P29622 427 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CDK7P50613 346 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 MTM1Q13496 603 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 XKR4Q5GH76 650 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 STRA8Q7Z7C7 330 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 AMIGO1Q86WK6 493 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ATP6V1C2Q8NEY4 427 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 STARD8Q92502 1023 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TSPAN18Q96SJ8 248 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 FAM53CQ9NYF3 392 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 UBA2Q9UBT2 640 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 SAGE2PA6NJ88 616 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 RGS14O43566 566 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 CST8O60676 142 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TCEA3O75764 348 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TPBGLP0DKB5 382 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ZNF7P17097 686 aaPredicted RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 KLRC1P26715 233 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GLRBP48167 497 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ST3GAL1Q11201 340 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ARMC12Q5T9G4 340 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ZNF57Q68EA5 555 aaPredicted RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 RAD9BQ6WBX8 426 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 PAGE2Q7Z2X7 111 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GPR141Q7Z602 305 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 IQCKQ8N0W5 287 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 PLGRKTQ9HBL7 147 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 MOV10Q9HCE1 1003 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 COMMD9Q9P000 198 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 DUSP12Q9UNI6 340 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TRPV2Q9Y5S1 764 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 EPN2O95208 641 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SARSP49591 514 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 ABRQ12979 859 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 NFYCQ13952 458 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 POU6F1Q14863 301 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GRIK4Q16099 956 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 CELF3Q5SZQ8 465 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 TMEM26Q6ZUK4 368 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TREML1Q86YW5 311 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GSPT2Q8IYD1 628 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 REPS2Q8NFH8 660 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 DDX47Q9H0S4 455 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 GPAMQ9HCL2 828 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 COPS7AQ9UBW8 275 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 AMACRQ9UHK6 382 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 MRPS17Q9Y2R5 130 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 COL1A2P08123 1366 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SLC28A1O00337 649 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 MAGEC1O60732 1142 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SH3BGRLO75368 114 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 MATN4O95460 622 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 CYB5AP00167 134 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 THRAP10827 490 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TFE3P19532 575 aaPredicted RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 TMEM119Q4V9L6 283 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 MPPE1Q53F39 396 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 LGI2Q8N0V4 545 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 AADATQ8N5Z0 425 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 BSNDQ8WZ55 320 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TNFRSF25Q93038 417 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 PCDHGA3Q9Y5H0 932 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ADH1AP07327 375 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ITGA8P53708 1063 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ERVK-21P61565 698 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GHRHRQ02643 423 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 CYP2A13Q16696 494 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 TMEM164Q5U3C3 297 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SETD6Q8TBK2 473 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 FICDQ9BVA6 458 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ROGDIQ9GZN7 287 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SSU72Q9NP77 194 aaKnown RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 PTTG2Q9NZH5 202 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 SPEF1Q9Y4P9 236 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 KMOO15229 486 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 NCK2O43639 380 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 IDH3BO43837 385 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 APODP05090 189 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 GIMD1P0DJR0 217 aa6.28□□□□□ -1.4
CDH13-209ENST00000567109 ARF4P18085 180 aaPredicted RBP6.28□□□□□ -1.4
CDH13-209ENST00000567109 UGT1A5P35504 534 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms